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SCNpilot_expt_1000_bf_scaffold_6824_curated

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_6824_curated_1
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..2134)
DNA (2133bp) protein (711aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000379CDE2
Beta-lactamase {ECO:0000313|EMBL:AHB49559.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
metallo-beta-lactamase superfamily hydrolase
SCNpilot_expt_1000_bf_scaffold_6824_curated_2

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comp(2144..2917)
DNA (774bp) protein (258aa)
biotin--acetyl-CoA-carboxylase ligase; K03524 BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00036B10C2
Marine sediment metagenome DNA, contig: S01H1_L00674 {ECO:0000313|EMBL:GAF85613.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCNpilot_expt_1000_bf_scaffold_6824_curated_3
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2926..4143)
DNA (1218bp) protein (406aa)
NADH-quinone oxidoreductase subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_00445};; NADH dehydrogenase I subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; NDH-1 subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
nuoN2; NADH dehydrogenase subunit N; K00343 NADH-quinone oxidoreductase subunit N [EC:1.6.5.3]
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00036736AD
SCNpilot_expt_1000_bf_scaffold_6824_curated_4
unknown

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comp(4403..5407)
DNA (1005bp) protein (335aa)
nuoM; NADH-quinone oxidoreductase subunit M (EC:1.6.5.3); K00342 NADH-quinone oxidoreductase subunit M [EC:1.6.5.3]
NADH-quinone oxidoreductase chain M (NADH dehydrogenase I, chain M) n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J8Z5_HYPSM
NADH-quinone oxidoreductase subunit M {ECO:0000313|EMBL:CPR21123.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
SCNpilot_expt_1000_bf_scaffold_6824_curated_5
unknown

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5576..5944
DNA (369bp) protein (123aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6824_curated_6
unknown

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comp(5916..7865)
DNA (1950bp) protein (650aa)
proton-translocating NADH-quinone oxidoreductase subunit L; K00341 NADH-quinone oxidoreductase subunit L [EC:1.6.5.3]
NADH:ubiquinone oxidoreductase subunit L n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI0003723898
NADH-quinone oxidoreductase subunit L {ECO:0000313|EMBL:CPR21120.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
SCNpilot_expt_1000_bf_scaffold_6824_curated_7
unknown

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comp(8187..8417)
DNA (231bp) protein (77aa)

This feature has no annotations

Displaying 7 items

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