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SCNpilot_expt_1000_bf_scaffold_3871_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3871_curated_1
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..913)
DNA (912bp) protein (304aa)
dTDP-glucose 4,6-dehydratase; K08679 UDP-glucuronate 4-epimerase [EC:5.1.3.6]
dTDP-glucose 4,6-dehydratase n=1 Tax=Rhodovulum sp. PH10 RepID=J6UEK8_9RHOB
Capsular biosynthesis protein CpsI {ECO:0000313|EMBL:EXL02825.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
SCNpilot_expt_1000_bf_scaffold_3871_curated_2
Hyphomonas sp. CY54-11-8, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(978..1898)
DNA (921bp) protein (307aa)
Glycosyl transferase, family 2 n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H584_SALRM
Uncharacterized protein {ECO:0000313|EMBL:KCZ47302.1}; TaxID=1280944 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas sp. CY54-11-8.;"
wcaA; family 2 glycosyl transferase
SCNpilot_expt_1000_bf_scaffold_3871_curated_3
uncultured Thiohalocapsa sp. PB-PSB1, Thiohalocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1874..2845)
DNA (972bp) protein (324aa)
UDP-glucose 4-epimerase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2]
Uncharacterized protein n=1 Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4IGF9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ESQ08997.1}; TaxID=1385625 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiohalocapsa; environmental samples.;" source="uncultured Thiohalocapsa sp. PB-PSB1.;"
SCNpilot_expt_1000_bf_scaffold_3871_curated_4
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2862..3455)
DNA (594bp) protein (198aa)
acetyltransferase; K03818 putative colanic acid biosynthesis acetyltransferase WcaF [EC:2.3.1.-]
Acetyltransferase n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EFS1_9RHOB
Acetyltransferase {ECO:0000313|EMBL:ESW59823.1}; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. CACIA14H1.;"
SCNpilot_expt_1000_bf_scaffold_3871_curated_5
Ponticoccus sp. UMTAT08, Ponticoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3473..4684)
DNA (1212bp) protein (404aa)
Putative uncharacterized protein n=1 Tax=Parvularcula bermudensis (strain ATCC BAA-594 / HTCC2503 / KCTC 12087) RepID=E0TC53_PARBH
Glycosyl transferase, group 1 {ECO:0000313|EMBL:KHQ50160.1}; TaxID=1515334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ponticoccus.;" source="Ponticoccus sp. UMTAT08.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3871_curated_6
CG_Cyano_02, Cyanobacteria, Bacteria

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comp(4684..6153)
DNA (1470bp) protein (490aa)
Uncharacterized protein n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QLZ2_METTR
hypothetical protein
Tax=CG_Cyano_02
SCNpilot_expt_1000_bf_scaffold_3871_curated_7
Parvularcula bermudensis, Parvularcula, Parvularculales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6232..7404)
DNA (1173bp) protein (391aa)
Glycosyl transferase group 1 n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QLZ3_METTR
group 1 glycosyl transferase
Glycosyl transferase, group 1 {ECO:0000313|EMBL:ADM10304.1}; TaxID=314260 species="Bacteria; Proteobacteria; Alphaproteobacteria; Parvularculales; Parvularculaceae; Parvularcula.;" source="Parvularcula bermudensis (strain ATCC BAA-594 / HTCC2503 / KCTC; 12087).;"
SCNpilot_expt_1000_bf_scaffold_3871_curated_8
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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comp(7423..8778)
DNA (1356bp) protein (452aa)
Uncharacterized protein n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QLZ4_METTR
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
SCNpilot_expt_1000_bf_scaffold_3871_curated_9
CG_Cyano_02, Cyanobacteria, Bacteria

Not on your lists

comp(8778..10031)
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QLZ5_METTR
hypothetical protein
Tax=CG_Cyano_02
SCNpilot_expt_1000_bf_scaffold_3871_curated_10
RBG_13_OP3X_46_9_curated, OP3X, Bacteria

Not on your lists

comp(10016..10789)
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Mastigocladopsis repens RepID=UPI0002D986CC
glycosyl transferase group 1
Tax=RBG_13_OP3X_46_9_curated
SCNpilot_expt_1000_bf_scaffold_3871_curated_11
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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comp(11044..11364)
DNA (321bp) protein (107aa)
Glycosyl transferase family 2 n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZW30_OPITP
glycosyl transferase family protein
Glycosyl transferase family 2 {ECO:0000313|EMBL:ACB76044.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
Displaying 11 items

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