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SCNpilot_expt_1000_bf_scaffold_4131_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4131_curated_1
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..442
DNA (441bp) protein (147aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; K00529 ferredoxin--NAD+ reductase [EC:1.18.1.3]
Uncharacterized protein n=1 Tax=Caulobacter crescentus OR37 RepID=R0D1K3_CAUCE
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:ADG08685.1}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
SCNpilot_expt_1000_bf_scaffold_4131_curated_2
unknown

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comp(461..1363)
DNA (903bp) protein (301aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4131_curated_3
unknown

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2295..2747
DNA (453bp) protein (151aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4131_curated_4
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2865..4304
DNA (1440bp) protein (480aa)
hypothetical protein n=1 Tax=Methylocystis rosea RepID=UPI00037D6F6C
porin
Porin {ECO:0000313|EMBL:CCJ06677.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
SCNpilot_expt_1000_bf_scaffold_4131_curated_5
Yersinia pseudotuberculosis, Yersinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4474..5295
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003B51F67
Hemagglutination repeat-containing protein {ECO:0000313|EMBL:CRG51781.1}; TaxID=633 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia.;" source="Yersinia pseudotuberculosis.;"
YadA domain-containing protein
SCNpilot_expt_1000_bf_scaffold_4131_curated_6
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5386..6093
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V5R7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ENN86407.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4131_curated_7
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6245..7279)
DNA (1035bp) protein (345aa)
2-ketogluconate reductase (EC:1.1.1.215); K00090 gluconate 2-dehydrogenase [EC:1.1.1.215] rbh
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000365278F
Lactate dehydrogenase-like oxidoreductase {ECO:0000313|EMBL:EHR05453.1}; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;"
SCNpilot_expt_1000_bf_scaffold_4131_curated_8
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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7511..8563
DNA (1053bp) protein (351aa)
zinc-containing alcohol dehydrogenase superfamily protein (EC:1.1.1.14); K00008 L-iditol 2-dehydrogenase [EC:1.1.1.14]
Alcohol dehydrogenase n=1 Tax=Oceanibaculum indicum P24 RepID=K2J8N1_9PROT
Alcohol dehydrogenase {ECO:0000313|EMBL:EKE71583.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
SCNpilot_expt_1000_bf_scaffold_4131_curated_9
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8711..10210
DNA (1500bp) protein (500aa)
methylmalonate-semialdehyde dehydrogenase; K00140 malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
Methylmalonate-semialdehyde dehydrogenase (Acylating) n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q134G3_RHOPS
Methylmalonate-semialdehyde dehydrogenase {ECO:0000313|EMBL:EJZ32194.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
SCNpilot_expt_1000_bf_scaffold_4131_curated_10
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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10278..10913
DNA (636bp) protein (212aa)
gst; glutathione S-transferase (EC:2.5.1.18); K00799 glutathione S-transferase [EC:2.5.1.18]
Glutathione S-transferase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JT59_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_expt_1000_bf_scaffold_4131_curated_11
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10942..11514
DNA (573bp) protein (191aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YCN6_9BRAD
Putative uncharacterized protein {ECO:0000313|EMBL:EHR01216.1}; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4131_curated_12
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11528..12778
DNA (1251bp) protein (417aa)
Uncharacterized protein n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RHX6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESR24914.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
hypothetical protein
Displaying 12 items

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