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SCNpilot_expt_1000_bf_scaffold_3255_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3255_curated_1
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..1074
DNA (1074bp) protein (358aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
DNA gyrase subunit beta (EC:5.99.1.3); K02470 DNA gyrase subunit B [EC:5.99.1.3]
DNA gyrase subunit B n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5S9G5_9RHIZ
SCNpilot_expt_1000_bf_scaffold_3255_curated_2
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1218..1523
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SK23_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:AHB50470.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
SCNpilot_expt_1000_bf_scaffold_3255_curated_3
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1664..2452
DNA (789bp) protein (263aa)
2-dehydro-3-deoxyglucarate aldolase (EC:4.1.2.-); K02510 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase [EC:4.1.2.-]
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QQN3_RALPI
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase {ECO:0000313|EMBL:AGW93330.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii DTP0602.;"
SCNpilot_expt_1000_bf_scaffold_3255_curated_4
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2528..2689)
DNA (162bp) protein (54aa)
Putative uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JT16_HYPDA
hypothetical protein; K07112
Uncharacterized protein {ECO:0000313|EMBL:ADJ22501.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
SCNpilot_expt_1000_bf_scaffold_3255_curated_5
unknown

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3439..3684
DNA (246bp) protein (82aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3255_curated_6
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3654..7142)
DNA (3489bp) protein (1163aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SD46_9RHIZ
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
chromosome segregation protein SMC; K03529 chromosome segregation protein
SCNpilot_expt_1000_bf_scaffold_3255_curated_7
unknown

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comp(7206..8045)
DNA (840bp) protein (280aa)
Disulfide bond formation protein DsbD n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SAY4_9RHIZ
Disulfide bond formation protein DsbD {ECO:0000313|EMBL:CPR22437.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
disulfide bond formation protein D
SCNpilot_expt_1000_bf_scaffold_3255_curated_8
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8053..8754)
DNA (702bp) protein (234aa)
DSBA oxidoreductase n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BAG4_9RHIZ
DSBA oxidoreductase
DSBA oxidoreductase {ECO:0000313|EMBL:AGK59262.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_expt_1000_bf_scaffold_3255_curated_9
alpha proteobacterium JLT2015, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9034..9486)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium JLT2015 RepID=M2TP11_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EMD83486.1}; TaxID=1234595 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium JLT2015.;"
nuclear protein SET; K07117
SCNpilot_expt_1000_bf_scaffold_3255_curated_10
unknown

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9898..10944
DNA (1047bp) protein (349aa)
Tetraacyldisaccharide 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093884}; EC=2.7.1.130 {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093878};; Lipid A 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
lpxK; tetraacyldisaccharide 4'-kinase (EC:2.7.1.130); K00912 tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000380EC8A
Displaying 10 items

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