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SCNpilot_expt_1000_bf_scaffold_12910_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_12910_curated_1
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..903)
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00036DE9FE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK59049.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_expt_1000_bf_scaffold_12910_curated_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1308..2156)
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000367DA3C
lytic murein transglycosylase
Lytic murein transglycosylase {ECO:0000313|EMBL:ABJ05991.1}; Flags: Precursor;; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
SCNpilot_expt_1000_bf_scaffold_12910_curated_3
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2251..3243)
DNA (993bp) protein (331aa)
galE; UDP-galactose 4-epimerase (EC:5.1.3.2); K01784 UDP-glucose 4-epimerase [EC:5.1.3.2]
UDP-galactose 4-epimerase {ECO:0000313|EMBL:CCB63974.1}; EC=5.1.3.2 {ECO:0000313|EMBL:CCB63974.1};; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
UDP-galactose 4-epimerase n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JD97_HYPSM
SCNpilot_expt_1000_bf_scaffold_12910_curated_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3408..4295
DNA (888bp) protein (296aa)
Glucose-1-phosphate uridylyltransferase {ECO:0000313|EMBL:KFC74097.1}; EC=2.7.7.9 {ECO:0000313|EMBL:KFC74097.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
UTP-glucose-1-phosphate uridylyltransferase n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B9Z5_9RHIZ
UTP-glucose-1-phosphate uridylyltransferase
SCNpilot_expt_1000_bf_scaffold_12910_curated_5
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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4307..5140
DNA (834bp) protein (278aa)
rhodanese; K01011 thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] id=14431094 bin=bin3_NC10 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin3_NC10 organism_group=NC10
rhodanese-related sulfurtransferase; K01011 thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
SCNpilot_expt_1000_bf_scaffold_12910_curated_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5212..7002
DNA (1791bp) protein (597aa)
FAD linked oxidase domain-containing protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WS66_9GAMM
FAD/FMN-dependent dehydrogenase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_expt_1000_bf_scaffold_12910_curated_7
unknown

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7109..7291
DNA (183bp) protein (61aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_12910_curated_8
Achromobacter arsenitoxydans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7369..7794)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0F226_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EHK67683.1}; TaxID=477184 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter arsenitoxydans SY8.;"
SCNpilot_expt_1000_bf_scaffold_12910_curated_9
unknown

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comp(7821..8651)
DNA (831bp) protein (277aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_12910_curated_10
Thauera sp. SWB20, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8683..9369)
DNA (687bp) protein (229aa)
Peptidase M12A astacin n=1 Tax=Sinorhizobium meliloti CCNWSX0020 RepID=H0GAM9_RHIML
Matrixin family protein {ECO:0000313|EMBL:KIN92473.1}; TaxID=1572758 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. SWB20.;"
ATPase
Displaying 10 items

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