ggKbase home page

SCNpilot_expt_1000_bf_scaffold_3801_curated_11

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: 9039..10496

Top 3 Functional Annotations

Value Algorithm Source
2-methylcitrate dehydratase n=1 Tax=Rhodococcus opacus RepID=UPI00029CB300 similarity UNIREF
DB: UNIREF100
  • Identity: 48.8
  • Coverage: 469.0
  • Bit_score: 456
  • Evalue 4.10e-125
MmgE/PrpD family protein similarity KEGG
DB: KEGG
  • Identity: 34.0
  • Coverage: 462.0
  • Bit_score: 256
  • Evalue 1.50e-65
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 66.5
  • Coverage: 475.0
  • Bit_score: 665
  • Evalue 8.20e-188

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1458
ATGAGGACATTCCAGCGGATTGCTGACGAAGACCCCATGGAGACGCTCTGTCGGATGGTCGTCGAGACGAGTTACGACGATCTACCGAAGGACGTCCGGGAGTTCGGCAAGAAGCAGATCCTCGACATCATCGGCGTTTCGATGGGCGGCTCCGGCATGGACGGCATCGCCGATGTCGTTGCCTTCGTGCGTGATCAGGGCGGCAAGCCGGAGAGCCATATTCCATTCTACGGCGGGAAAGTACCGGCCGCGATGGCGGCATTCGCGCTGGCGCCGATGGCGCGTGCCATGGACATGGGCGACACGCACTACGAAGCCGGGCATGGCGCGGAGTATACCGTGCCGACGCTGCTCGCCGCGACCGGGCTGAAGGATAAGACGAGCGGACGGGAGCTTCTGACGGCGTTCATCGTTGCGCAGGAGCTCATGATCCGGACGGGCCTTGGCTGCTCGTTCAAAAGCATCGAGCAGCCCGGCGGCTCTGCCGGAGGGCACTACATTTTTGGTGCGGTGGCCGCAGCCGCCAAGCTGCTCGGCTTCAGCCACGCTGAGCTGATGAACGCGCTGGGCATCGCCAAGCTGATGACGCAGCCGCACGACGCCTCGATGTACAACGAAGGCGCCTCGATGATCAGGTTCCATCATGGTTTCGTCGCGCAGGATGCGATCAACATCTGCCGGATGAGCCGGCTCGGCGTGACGGGACCGGTCAAGGAATTCCTGGCGGGAGAGCAGCGCGGCTACTACGCCCTCTTTGCACGAAAGGGTCGCATCGATCTGGATGCAGTCACGCACGAGCTTGGCGCGCGCTGGGAGATGATGCGCACGAGTTTCAAGGCGCACGCTGCCTGCAAGTGCACGCACACAGGCATCGATCTCTTGCTCGAGCAGATGAGGGAGCACGAGTTCAGCGTCGGCGATGTCGAGAGCATGCACCTAGATGTTGGCAGCCTGAACTGGACAGTGGTGGCGATCCCCAAGGCGGAGAAATGGAAGCCGGAAACGGTCCCGCAATGCCAGTTCAGCTTGCCCTACGTCATCTCGACGGTTGTGCACGATGGTGGAATCTTCCTCGATGCCTACACGCCGCAAGCCCGCTCGCGCGCCGATGTGCGCGGTTTCATGGAGCGCATCTCGGCGGATCTCGATGAGAGCTTGCCGCCGCTCGGAACGCGCCTGACCACAAAGCTGCGAGACGGTCGGACGATTGCGGGCGTGTGCACAATTGAGAAGGGGCACCCGGACAATCCCCTGACGGTCGAAGAGGTGGCTGCAAAGTTCCGCAGGTGCGCGCCTTTCGCCGCCTATCGGCTCGATGATGCGGCCATCTCGAAGGTCCTCGAGAATGTTCTGGTGCTCGAGAAGGTCTCCGATGTCGCCGCCGACGTCGTATCGCCGCTGGTGCCGCGCGACGTGTCCGGTCGGCCGAAGAGCCTGCTGGCCGAGGCCGCGAGCTGA
PROTEIN sequence
Length: 486
MRTFQRIADEDPMETLCRMVVETSYDDLPKDVREFGKKQILDIIGVSMGGSGMDGIADVVAFVRDQGGKPESHIPFYGGKVPAAMAAFALAPMARAMDMGDTHYEAGHGAEYTVPTLLAATGLKDKTSGRELLTAFIVAQELMIRTGLGCSFKSIEQPGGSAGGHYIFGAVAAAAKLLGFSHAELMNALGIAKLMTQPHDASMYNEGASMIRFHHGFVAQDAINICRMSRLGVTGPVKEFLAGEQRGYYALFARKGRIDLDAVTHELGARWEMMRTSFKAHAACKCTHTGIDLLLEQMREHEFSVGDVESMHLDVGSLNWTVVAIPKAEKWKPETVPQCQFSLPYVISTVVHDGGIFLDAYTPQARSRADVRGFMERISADLDESLPPLGTRLTTKLRDGRTIAGVCTIEKGHPDNPLTVEEVAAKFRRCAPFAAYRLDDAAISKVLENVLVLEKVSDVAADVVSPLVPRDVSGRPKSLLAEAAS*