ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1890_curated_12

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: 13491..14291

Top 3 Functional Annotations

Value Algorithm Source
Hydroxymethylpyrimidine ABC transporter, transmembrane component n=1 Tax=Salipiger mucosus DSM 16094 RepID=S9QWD0_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 70.4
  • Coverage: 260.0
  • Bit_score: 378
  • Evalue 4.60e-102
Hydroxymethylpyrimidine ABC transporter, transmembrane component {ECO:0000313|EMBL:EPX83923.1}; TaxID=1123237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Salipiger.;" source="Salipiger mucosus DSM 16094.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.4
  • Coverage: 260.0
  • Bit_score: 378
  • Evalue 6.40e-102
binding-protein-dependent transporter inner membrane component; K02050 NitT/TauT family transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 55.8
  • Coverage: 260.0
  • Bit_score: 307
  • Evalue 4.10e-81

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Salipiger mucosus → Salipiger → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 801
ATGGTGGATGCCACAACAACTGCACCCAACAAAGCCGAGACGCGGACCAAACAAACCTCCTTCCGGGTGCGAGTGCTGGTTTACCAGATTGGGCTACTCGTCGGCATTCTTGGGTTCTGGGAAGCTGGCATCCGCCTCGGCTATCTCGAGGCTTATATCTACGGGGTGCCCTCTGGAGTGGCCTCCGCCTTCGCGAGCCAGCTTCTTGACGGAAGTCTGTTGCGCCATTTCTGGGTGACCGGGCAGGAAGTGGTCATCGGCTTTTTGATCGGCAGCCTGCTGGGGACGATAAGCGGATTGCTGCTCTGGCTCTCACCACTATGGGCAAGAGTCCTGCATCCCTACATGATCGCCCTCAACGGAGTTCCCAAGATCGCATTGGCCCCACTGATCATCGTGTGGTTCGGCCTGGGAATGGAATCCAAGATCGCGATCGCCGCGATAATTACCTTCATTGTCGCATTCCTGCAGGCCCATAAGGGGACACAGCAGATCGACAGCGACCTGATCCGACTCTTGCAATCTCTCGGTGCCAAGCCGCTGCAGATCTTTCGCATCGTTGTTGTGCCCGGCAGCCTGCCCTGGATTGTGTCTGCGTTGCGTCTCAACGTCGGCTTTGCGCTCATCGGGGCCGTCGTCGGCGAATACATCTCGGCCGAAGAAGGACTAGGCCACAAGGTCTACTACTCCGGTCAGCTCTACGATCTCAACAGCGTATGGGTCGGCATCTTCTCCTTGATGATCATGGCTCTGATGCTTGAGGTCGTTGTTTCATGGATCGAGAAGAAGCTGCAGTGGTAG
PROTEIN sequence
Length: 267
MVDATTTAPNKAETRTKQTSFRVRVLVYQIGLLVGILGFWEAGIRLGYLEAYIYGVPSGVASAFASQLLDGSLLRHFWVTGQEVVIGFLIGSLLGTISGLLLWLSPLWARVLHPYMIALNGVPKIALAPLIIVWFGLGMESKIAIAAIITFIVAFLQAHKGTQQIDSDLIRLLQSLGAKPLQIFRIVVVPGSLPWIVSALRLNVGFALIGAVVGEYISAEEGLGHKVYYSGQLYDLNSVWVGIFSLMIMALMLEVVVSWIEKKLQW*