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SCNpilot_expt_1000_bf_scaffold_4249_curated_8

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: comp(5991..6545)

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.2
  • Coverage: 174.0
  • Bit_score: 193
  • Evalue 3.50e-46
2'-5' RNA ligase; K01975 2'-5' RNA ligase [EC:6.5.1.-] similarity KEGG
DB: KEGG
  • Identity: 54.2
  • Coverage: 177.0
  • Bit_score: 186
  • Evalue 5.60e-45
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000378789D similarity UNIREF
DB: UNIREF100
  • Identity: 53.1
  • Coverage: 179.0
  • Bit_score: 188
  • Evalue 6.10e-45

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Taxonomy

No taxonomy information

Sequences

DNA sequence
Length: 555
ATGCCGCGCCTCTTCACCGCCATAGAAATCCCCGAGATCGTGCGGGCTCAGCTCGACCTCGTGAGGGGCAATCTGCCGGGCGCCAAGTGGGCCGACGTCGAGGACATGCACCTCACGATCCGCTTCTTCGGCGATATCGGAAATCTCGAAGCCGACGAACTGGTCAGCGCACTCGCTCGTGTCGATTTCGATCCTTTCGAGCTGAAAATCACCGGGCTCGGGGTGTTCGGCGGGCGCGAGCCCCGTGCCCTGTATGCGGGTATTGCCGATGCAGAACCCCTCAATGCCCTTCAACGCGCCAGCGAGCGCGCGGCCCGCGCCGCTCGCCTGCCGCCCGAGACACGGGCCTTCAAGCCGCACATCACGCTCGCCCGCCTGAAGAACACCAAGCCCGAGATGGTCGCGCGCTTCCTCAGTGGACGGCCGCCGCTCCAGGCATGGCCGTTCACCGTCGATCAATTCACGCTCATGTCGTCGCGCCCCGGGCAGGGTGGCGGCCCCTACGTTCGCGAGGAGCATTTTCACGCGCGCCCCGCCTGGGATGCGGCGCAGTAA
PROTEIN sequence
Length: 185
MPRLFTAIEIPEIVRAQLDLVRGNLPGAKWADVEDMHLTIRFFGDIGNLEADELVSALARVDFDPFELKITGLGVFGGREPRALYAGIADAEPLNALQRASERAARAARLPPETRAFKPHITLARLKNTKPEMVARFLSGRPPLQAWPFTVDQFTLMSSRPGQGGGPYVREEHFHARPAWDAAQ*