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SCNpilot_expt_1000_bf_scaffold_9330_curated_6

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: comp(4133..4408)

Top 3 Functional Annotations

Value Algorithm Source
soxD; sarcosine oxidase subunit delta (EC:1.5.3.1); K00304 sarcosine oxidase, subunit delta [EC:1.5.3.1] similarity KEGG
DB: KEGG
  • Identity: 66.0
  • Coverage: 97.0
  • Bit_score: 122
  • Evalue 8.40e-26
Sarcosine oxidase, delta subunit {ECO:0000313|EMBL:ACS39409.1}; EC=1.5.3.1 {ECO:0000313|EMBL:ACS39409.1};; TaxID=272630 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.0
  • Coverage: 97.0
  • Bit_score: 122
  • Evalue 3.70e-25
Sarcosine oxidase, delta subunit n=2 Tax=Methylobacterium extorquens RepID=C5B059_METEA similarity UNIREF
DB: UNIREF100
  • Identity: 66.0
  • Coverage: 97.0
  • Bit_score: 122
  • Evalue 2.70e-25

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Taxonomy

Methylobacterium extorquens → Methylobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 276
ATGCGCATCCGGTGCCCGTACTGCGGCGAGCGATCGAATGACGAGTTCACCGTGCTCGGCGATGCCGATGCGCTGATGGCCCGCCCGAGCGGCGATGATGCGGCCGCGTTCTACGACTACGCCTACCTGCGCACGAACCCGGCCGGGCAGCATCGCGAGCTCTGGTATCACGCCGCCGGCTGCCGACGCTGGCTGGTCGTGACGCGCGACACGCGCACGCACGCCATCGCGGATGTCGCATTGGCCAGCACGCGCGGCGACGGAGAGGCAGCATGA
PROTEIN sequence
Length: 92
MRIRCPYCGERSNDEFTVLGDADALMARPSGDDAAAFYDYAYLRTNPAGQHRELWYHAAGCRRWLVVTRDTRTHAIADVALASTRGDGEAA*