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SCNpilot_expt_1000_bf_scaffold_18822_curated_2

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: comp(215..583)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00036ED803 similarity UNIREF
DB: UNIREF100
  • Identity: 47.9
  • Coverage: 121.0
  • Bit_score: 120
  • Evalue 1.40e-24
30S ribosomal protein S30 {ECO:0000313|EMBL:AHB49468.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.7
  • Coverage: 120.0
  • Bit_score: 114
  • Evalue 8.00e-23
30S ribosomal protein S30P / sigma 54 modulation protein similarity KEGG
DB: KEGG
  • Identity: 42.5
  • Coverage: 113.0
  • Bit_score: 87
  • Evalue 2.30e-15

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Taxonomy

Hyphomicrobium nitrativorans → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 369
ATGACGACACCCCTCGAGATCTCCTTTCACGGAGTCGACAAGAGCGAAGCGCTCGAGGCCCGGATTCAGGAGAAATTCGCCCGTCTTCATGGCCATTTCGACCGCATCACGCACGCCCGCGTGGTGGTCTCCTCGCCGAACCGCACGGATGCACGGGCGAAGATGTTCACCGTGAAGGTCGATATCGGAATGCCCGGGCAGCCCCCAATCGTGATCAACAGCGAGGGTGACTATACGGACGTCTTCATTGCGCTGCGTGATACCTTCAATGCAGCGCAGCGGAAGCTCGATGCAACCGCAGGCAAAATCACCAACACGGCAAAGCGCGAGCGAGCGCGTCGCAAGCCGGCGCCGAACGGCGCGGCCTGA
PROTEIN sequence
Length: 123
MTTPLEISFHGVDKSEALEARIQEKFARLHGHFDRITHARVVVSSPNRTDARAKMFTVKVDIGMPGQPPIVINSEGDYTDVFIALRDTFNAAQRKLDATAGKITNTAKRERARRKPAPNGAA*