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SCNpilot_expt_1000_bf_scaffold_18822_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_18822_curated_1
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..208
DNA (207bp) protein (69aa)
cfa; putative cyclopropane-fatty-acyl-phospholipid synthase protein; K00574 cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
Cyclopropane-fatty-acyl-phospholipid synthase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SC21_9RHIZ
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:AHB48032.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
SCNpilot_expt_1000_bf_scaffold_18822_curated_2
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(215..583)
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00036ED803
30S ribosomal protein S30 {ECO:0000313|EMBL:AHB49468.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
30S ribosomal protein S30P / sigma 54 modulation protein
SCNpilot_expt_1000_bf_scaffold_18822_curated_3
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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771..1523
DNA (753bp) protein (251aa)
Strain UM270 sctg_0018_0001, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ60827.1}; EC=1.1.1.47 {ECO:0000313|EMBL:KIQ60827.1};; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
Short chain dehydrogenase n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4QWP2_9RHIZ
ygfF; short chain dehydrogenase
SCNpilot_expt_1000_bf_scaffold_18822_curated_4
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1537..1788)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RH43_PHEZH
Uncharacterized protein {ECO:0000313|EMBL:EXI91028.1}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
hypothetical protein; K09984 hypothetical protein
SCNpilot_expt_1000_bf_scaffold_18822_curated_5
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1812..2549)
DNA (738bp) protein (246aa)
Glutaryl-CoA dehydrogenase {ECO:0000313|EMBL:CCD84084.1}; EC=1.3.8.6 {ECO:0000313|EMBL:CCD84084.1};; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
Glutaryl-CoA dehydrogenase n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0RQ57_9BRAD
glutaryl-CoA dehydrogenase
SCNpilot_expt_1000_bf_scaffold_18822_curated_6
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3052..3606)
DNA (555bp) protein (185aa)
Nicotinamidase-like amidase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YNH9_9RHIZ
Nicotinamidase-like amidase {ECO:0000313|EMBL:EIM25521.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
isochorismatase domain-containing protein 2A
SCNpilot_expt_1000_bf_scaffold_18822_curated_7
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4151..4348
DNA (198bp) protein (66aa)
Protein translocase subunit SecE n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J599_HYPSM
protein translocation preprotein SecE; K03073 preprotein translocase subunit SecE
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCNpilot_expt_1000_bf_scaffold_18822_curated_8
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4412..4918
DNA (507bp) protein (169aa)
Transcription termination/antitermination protein NusG n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J598_HYPSM
nusG; transcription termination factor; K02601 transcriptional antiterminator NusG
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCNpilot_expt_1000_bf_scaffold_18822_curated_9
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5158..5586
DNA (429bp) protein (143aa)
50S ribosomal protein L11 n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SFM0_9RHIZ
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11
SCNpilot_expt_1000_bf_scaffold_18822_curated_10
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5592..5909
DNA (318bp) protein (106aa)
50S ribosomal protein L1 n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000374294C
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
rplA; 50S ribosomal protein L1; K02863 large subunit ribosomal protein L1
Displaying 10 items

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