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SCNpilot_expt_1000_bf_scaffold_18822_curated_10

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: 5592..5909

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L1 n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000374294C similarity UNIREF
DB: UNIREF100
  • Identity: 77.5
  • Coverage: 102.0
  • Bit_score: 168
  • Evalue 3.70e-39
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.2
  • Coverage: 105.0
  • Bit_score: 163
  • Evalue 1.30e-37
rplA; 50S ribosomal protein L1; K02863 large subunit ribosomal protein L1 similarity KEGG
DB: KEGG
  • Identity: 70.5
  • Coverage: 105.0
  • Bit_score: 151
  • Evalue 1.10e-34

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Taxonomy

Hyphomicrobium nitrativorans → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 318
ATGGCAGCACCGAGCAAAGAAGTCATCAAGGCGACCCGCGTCGCAGGCGGCAAGCGTCTTGCCAAGCTCCAGGCGACCGTGGACCGCAACAAGAGCTATGGCATCGACGAGGCTGTGAAGCTCGTGAAGTCGAATGCCAAGGCGAAGTTCGACGAGACCGTCGAGATCGCGATGAACCTCGGCGTCGATCCGCGCCATGCCGACCAGATGGTCCGCGGCGTGTGCAACCTGCCGCACGGCTCGGGCCGCACGCAGCGCGTTGCCGTGTTCGCGCGTGGTCCCAAGGCCGAGGAGGCCAAGGCCGCCGGTGCCGACATC
PROTEIN sequence
Length: 106
MAAPSKEVIKATRVAGGKRLAKLQATVDRNKSYGIDEAVKLVKSNAKAKFDETVEIAMNLGVDPRHADQMVRGVCNLPHGSGRTQRVAVFARGPKAEEAKAAGADI