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SCNpilot_expt_1000_bf_scaffold_11181_curated_5

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: 3518..4135

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00037507D5 similarity UNIREF
DB: UNIREF100
  • Identity: 70.2
  • Coverage: 205.0
  • Bit_score: 282
  • Evalue 4.50e-73
Conjugative transfer protein TrbL {ECO:0000313|EMBL:AGC71249.1}; TaxID=1256589 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_75.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.4
  • Coverage: 207.0
  • Bit_score: 232
  • Evalue 4.40e-58
conjugal transfer protein TrbL; K07344 type IV secretion system protein TrbL similarity KEGG
DB: KEGG
  • Identity: 42.5
  • Coverage: 219.0
  • Bit_score: 145
  • Evalue 1.60e-32

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Taxonomy

uncultured bacterium A1Q1_fos_75 → Bacteria

Sequences

DNA sequence
Length: 618
ATGCGGCCGACCGGCGAGGTGACGCTGACGCAGGCGGCGTCGTGCATCCTTGGCGCGATTGCCGTGTTCGGCCTCGCGATCTTCGTTCCCGGTATTGCTGCCGGTCTGATCACCGGCGCTCCGCAGTTGGGAGCCGGCGCTGCGGTCGCAACCACCGCCGCGCTCGGTGGCACGGTCGTTGCCGGCGGCATCGCTACCGCAGGCGCAGCGCGCATGGCGAGTCGTACGGCGGGTGGTGCGATCAAGTCGGCCGCCTCGCTCTCGGGCCGCGTCGGTGCGGCCTATGAGGCCGGTGGTGCAGCCGGTGTGGCGCGCGCGACCGTCTCCGGGCCGGCCTCGCGCATGGCGTCATCGGCAACAGCGCCTGTGCGCAATGCCTATCGCCACGGCGCCGCGCAGGGATACCGCGATGCAACGCCATCAGGCGAGTCCGGCGGCAAAGGCCCCGATGGCGATGCTCCGGGCAGCGGCGCGCCCGCATCGGGTCCGCCAGCTTGGGCTCAGACCATGGCCCGACGCCAGCGCATGACCCAGGCCGGAATGATGGCCGCGCACGCGCTGCGTGAGGGCGATCGGCCCGGCATGAGCAGCGGCCCGGATCTCAAGAACAAGTCGTAG
PROTEIN sequence
Length: 206
MRPTGEVTLTQAASCILGAIAVFGLAIFVPGIAAGLITGAPQLGAGAAVATTAALGGTVVAGGIATAGAARMASRTAGGAIKSAASLSGRVGAAYEAGGAAGVARATVSGPASRMASSATAPVRNAYRHGAAQGYRDATPSGESGGKGPDGDAPGSGAPASGPPAWAQTMARRQRMTQAGMMAAHALREGDRPGMSSGPDLKNKS*