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SCNpilot_expt_1000_bf_scaffold_11181_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_11181_curated_1

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1..2565
DNA (2565bp) protein (855aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI0003630B48
Conjugative transfer protein TrbE {ECO:0000313|EMBL:AGC71252.1}; TaxID=1256589 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_75.;"
conjugal transfer protein Trbe; K03199 type IV secretion system protein VirB4
SCNpilot_expt_1000_bf_scaffold_11181_curated_2
unknown

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2577..2747
DNA (171bp) protein (57aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_11181_curated_3
unknown

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comp(2869..3015)
DNA (147bp) protein (49aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_11181_curated_4
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3076..3348)
DNA (273bp) protein (91aa)
Uncharacterized protein {ECO:0000313|EMBL:CEG06682.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
SCNpilot_expt_1000_bf_scaffold_11181_curated_5

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3518..4135
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00037507D5
Conjugative transfer protein TrbL {ECO:0000313|EMBL:AGC71249.1}; TaxID=1256589 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_75.;"
conjugal transfer protein TrbL; K07344 type IV secretion system protein TrbL
SCNpilot_expt_1000_bf_scaffold_11181_curated_6

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4151..4849
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000380D457
Conjugative transfer protein TrbF {ECO:0000313|EMBL:AGC71248.1}; TaxID=1256589 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_75.;"
Conjugal transfer protein; K03200 type IV secretion system protein VirB5
SCNpilot_expt_1000_bf_scaffold_11181_curated_7
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4854..5162
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00035CCDD0
P-type conjugative transfer protein TrbG; K03204 type IV secretion system protein VirB9
P-type conjugative transfer protein TrbG {ECO:0000313|EMBL:ABS65859.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_expt_1000_bf_scaffold_11181_curated_8

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5217..5846
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00035CCDD0
Conjugative transfer protein TrbG {ECO:0000313|EMBL:AGC71247.1}; TaxID=1256589 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_75.;"
P-type conjugative transfer protein TrbG; K03204 type IV secretion system protein VirB9
SCNpilot_expt_1000_bf_scaffold_11181_curated_9

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5843..7123
DNA (1281bp) protein (427aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI0003630481
Conjugative transfer protein TrbI {ECO:0000313|EMBL:AGC71246.1}; TaxID=1256589 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_75.;"
conjugation TrbI family protein; K03195 type IV secretion system protein VirB10
SCNpilot_expt_1000_bf_scaffold_11181_curated_10

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7142..7456
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI0003630C8F
Uncharacterized protein {ECO:0000313|EMBL:AGC71245.1}; TaxID=1256589 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_75.;"
hypothetical protein
Displaying 10 items

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