ggKbase home page

SCNpilot_expt_1000_bf_scaffold_15137_curated_14

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: comp(10248..11141)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Elioraea tepidiphila RepID=UPI0003746248 similarity UNIREF
DB: UNIREF100
  • Identity: 66.1
  • Coverage: 283.0
  • Bit_score: 394
  • Evalue 9.00e-107
ABC transporter permease {ECO:0000313|EMBL:KAJ32710.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.5
  • Coverage: 289.0
  • Bit_score: 406
  • Evalue 4.20e-110
ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 62.1
  • Coverage: 285.0
  • Bit_score: 369
  • Evalue 9.70e-100

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 894
ATGCTCGGGTTGTTCTCAAGTCTCGACTGCTCGCTCGACGTCTTCTTTGTCGAAGCGCTGCTCAACGGCGTGCTGCTGGCCGGATTGCTCGCTCTCCTGGCGCTCGGCCTCAACCTCATCTTCGGCGTCATCGACGTCGTATGGATCTGCTACGCCGAGCTCGTCATGATCGGGATGTACGCGATCTTCTACTTCGTGCAGGTCGCCGGCATACCCTTGCCCCTCTCCTTCCTGCTGGCGATCGGCCTTGTCGCGTGCGCCGGCACGATCCTGCACTACCTCGTCATCCGTCCCGTGCTCGACCAGCCGCCGATCAACCAGCTCCTGGTGACGGGCGGCGTGCTGTTCCTGCTGCAGGCGGCGGCGACCATGGCGTTCGGCATCGAATTCCGGAACCTCGGCATTCGGCTCGGCTCGGTGAACATNNNNNNNNTGAGCTTTGCCTGGAGCCGGATCATCACGTTCGCCGTCGCGCTCGGGGCCATGATCCTGCTCTGGCAGTTCCTCACGCGCACCTACATAGGCACCGCGATCCGCGCGATCTCGCAGGACCGCCAGATCATGCCGCTCATGGGCGTCGACCAGAAGAAGATCTATCTTGCGACCTCGGCGATCGGCGGCGGCCTTGCCGGCCTCGCGTCCTGCCTGATGGTTCTCCAGTACGACATCTATCCGCAGATCGGCCTGCAGTTCGGCCCGCTCACGTTCATGATCTGCGTGCTCGGCGGCCTCGGCAACATGGTCGGCGGCTTCGTCGCGGCCTTCATCATCGCCCAGTTCATCACCATCGGCGGATCGTGCGTCGCGACCGAGTGGGGCTACGCAGTGGCCTTCCTGTTCTTCATGCTCGTCATCTTCGTCCGTCCGCAAGGTCTCTTCGGAGCCAAGTCATGA
PROTEIN sequence
Length: 298
MLGLFSSLDCSLDVFFVEALLNGVLLAGLLALLALGLNLIFGVIDVVWICYAELVMIGMYAIFYFVQVAGIPLPLSFLLAIGLVACAGTILHYLVIRPVLDQPPINQLLVTGGVLFLLQAAATMAFGIEFRNLGIRLGSVNXXXXSFAWSRIITFAVALGAMILLWQFLTRTYIGTAIRAISQDRQIMPLMGVDQKKIYLATSAIGGGLAGLASCLMVLQYDIYPQIGLQFGPLTFMICVLGGLGNMVGGFVAAFIIAQFITIGGSCVATEWGYAVAFLFFMLVIFVRPQGLFGAKS*