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SCNpilot_expt_1000_bf_scaffold_15137_curated

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_15137_curated_1
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..1074)
DNA (1074bp) protein (358aa)
Serine/threonine protein kinase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SDG4_9RHIZ
Serine/threonine protein kinase {ECO:0000313|EMBL:AHB48100.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
Serine/threonine-protein kinase-like domain-containing protein
SCNpilot_expt_1000_bf_scaffold_15137_curated_2
unknown

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2032..2694
DNA (663bp) protein (221aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_15137_curated_3
unknown

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2704..2994
DNA (291bp) protein (97aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_15137_curated_4
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3414..4631
DNA (1218bp) protein (406aa)
Putative FAD-binding dehydrogenase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JR28_9PROT
Putative FAD-binding dehydrogenase {ECO:0000313|EMBL:EKE76982.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
FAD linked oxidase domain-containing protein
SCNpilot_expt_1000_bf_scaffold_15137_curated_5
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4679..5563
DNA (885bp) protein (295aa)
3-hydroxyisobutyrate dehydrogenase {ECO:0000256|RuleBase:RU910714}; Short=HIBADH {ECO:0000256|RuleBase:RU910714};; EC=1.1.1.31 {ECO:0000256|RuleBase:RU910714};; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae WSM1455.;"
mmsB; 3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31)
3-hydroxyisobutyrate dehydrogenase n=1 Tax=Rhizobium leguminosarum bv. viciae WSM1455 RepID=J0BW94_RHILV
SCNpilot_expt_1000_bf_scaffold_15137_curated_6
unknown

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comp(5608..5931)
DNA (324bp) protein (108aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_15137_curated_7
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6266..6430
DNA (165bp) protein (55aa)
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31)
3-hydroxyisobutyrate dehydrogenase {ECO:0000313|EMBL:CCJ06440.1}; EC=1.1.1.31 {ECO:0000313|EMBL:CCJ06440.1};; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
3-hydroxyisobutyrate dehydrogenase n=1 Tax=Methylocystis rosea RepID=UPI0003649A8F
SCNpilot_expt_1000_bf_scaffold_15137_curated_8
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6462..7064
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H6Y7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KJC58971.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_15137_curated_9
unknown

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comp(7061..7231)
DNA (171bp) protein (57aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_15137_curated_10
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7479..7742
DNA (264bp) protein (88aa)
Putative uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JUN3_HYPDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ24663.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
SCNpilot_expt_1000_bf_scaffold_15137_curated_11
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7739..8533
DNA (795bp) protein (265aa)
Methyltransferase small n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JUN2_HYPDA
methyltransferase small
Methyltransferase small {ECO:0000313|EMBL:ADJ24662.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
SCNpilot_expt_1000_bf_scaffold_15137_curated_12
unknown

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8673..9155
DNA (483bp) protein (161aa)
peroxiredoxin protein, antioxidant protein, AhpC/TSA family protein (EC:1.11.1.15)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037A4759
Redoxin domain protein {ECO:0000313|EMBL:CPR22423.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
SCNpilot_expt_1000_bf_scaffold_15137_curated_13
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9238..10251)
DNA (1014bp) protein (338aa)
ABC transporter permease n=1 Tax=Elioraea tepidiphila RepID=UPI00036C03EB
ABC transporter permease {ECO:0000313|EMBL:EKE69534.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
ABC transporter permease
SCNpilot_expt_1000_bf_scaffold_15137_curated_14
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10248..11141)
DNA (894bp) protein (298aa)
ABC transporter permease n=1 Tax=Elioraea tepidiphila RepID=UPI0003746248
ABC transporter permease {ECO:0000313|EMBL:KAJ32710.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
ABC transporter permease
SCNpilot_expt_1000_bf_scaffold_15137_curated_15
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11208..11912)
DNA (705bp) protein (235aa)
ABC transporter ATP-binding protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2IHF1_9PROT
ABC transporter ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_expt_1000_bf_scaffold_15137_curated_16
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11930..12205)
DNA (276bp) protein (92aa)
Flagellum-specific ATP synthase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1II60_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig186, whole genome shotgun sequence {ECO:0000313|EMBL:KIU43914.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
ABC transporter ATP-binding protein
Displaying 16 items

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