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SCNpilot_expt_1000_bf_scaffold_1853_curated_3

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: comp(1260..2243)

Top 3 Functional Annotations

Value Algorithm Source
TRAP dicarboxylate transporter-DctP subunit n=1 Tax=Agrobacterium tumefaciens str. Cherry 2E-2-2 RepID=M8APG5_RHIRD similarity UNIREF
DB: UNIREF100
  • Identity: 47.7
  • Coverage: 323.0
  • Bit_score: 317
  • Evalue 1.50e-83
C4-dicarboxylate ABC transporter substrate-binding protein {ECO:0000313|EMBL:KFI26911.1}; TaxID=1105367 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paenirhodobacter.;" source="Paenirhodobacter enshiensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.2
  • Coverage: 326.0
  • Bit_score: 338
  • Evalue 1.20e-89
TRAP dicarboxylate transporter subunit DctP similarity KEGG
DB: KEGG
  • Identity: 49.7
  • Coverage: 318.0
  • Bit_score: 315
  • Evalue 1.80e-83

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Taxonomy

Paenirhodobacter enshiensis → Paenirhodobacter → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 984
ATGGACAGACGGACACTCATTATCGCTGGGGCAGCTCTCATGCTGGGCGGCATGCCGGCCCATGCTGGACAGACTTGGGACATGGCTGTCGCCTATCCGCCCGGCAACTATCACGCCAAGAGCGCCGAGCGCTTCGCAACCGAGGTCGCCGCCGCCACCAAGGGCGAAGTGACCATCAAGGTGCAGGCCGGAGGGGCGCTCGGGTTCAAGGGCCCCGAGATGCTTGCTGCCGTCCGCGACGGGCTGGTGCCCGTCGGCACCATGCTCCTCAACCAGCAAGTCGGCGTAGAGCCGCTGCTCGGCATTGCATCGCTGCCCTATCTCGTCTCCAGCCCTTCGGAGATGCGCACCATCACGGATCTAGCCCGCCCGGCGTATGATCGCATCGCTCAGAAGCACAATCAGAAGATCCTCTACATGGTGCCCTGGCCGGGCCAGAACATCTTCGCCAAGACGGAGGTGAAGGCGCCGGAGGGCTTCCGCAGCTTGAAGATCCGCACGGTCGACCGCAACGGCAGCGACTTCTTCCGCGAGCTCGGCGCGTCACCCGCTCAGATGCCGTGGGGTGAGGTCGTGCCTGCGCTCGCGACCGGCGTCATCAATAGCGTCACGACGTCGAGCTCTTCGGGCGTCGACGGCCAATTCTGGGACTTCACCAGCTTCTGCCATCTGGTGAACTGGCAGTCGAACTTCGACATGGTGACGGTCAATCTCGCCGCCTGGAAGAAGCTGACGCCGGATCAGCAGAAGGCGATCGTGGATGTCGCCAAGCGGCTCGAGCCGGAATTCTGGAAGGCCGCGGAGCAGGAGGACGCCGACAAGCTGAAGCTCTTGTCCGACAAGGGCGTGAAGATGGTGCAGTCTAACGATACCCTGCGCGCCTTCATGATCGCCAAGGCAACGCCGAAGTGGGATGCATTCATCGCCCAGGTTCCAGCCGCGAAAGAGATCATCGAGAAGTATCGCGCCGCGGTCAAGAAGTGA
PROTEIN sequence
Length: 328
MDRRTLIIAGAALMLGGMPAHAGQTWDMAVAYPPGNYHAKSAERFATEVAAATKGEVTIKVQAGGALGFKGPEMLAAVRDGLVPVGTMLLNQQVGVEPLLGIASLPYLVSSPSEMRTITDLARPAYDRIAQKHNQKILYMVPWPGQNIFAKTEVKAPEGFRSLKIRTVDRNGSDFFRELGASPAQMPWGEVVPALATGVINSVTTSSSSGVDGQFWDFTSFCHLVNWQSNFDMVTVNLAAWKKLTPDQQKAIVDVAKRLEPEFWKAAEQEDADKLKLLSDKGVKMVQSNDTLRAFMIAKATPKWDAFIAQVPAAKEIIEKYRAAVKK*