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SCNpilot_expt_1000_bf_scaffold_21725_curated_3

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: 1505..2089

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S6 n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JYS1_HYPDA similarity UNIREF
DB: UNIREF100
  • Identity: 67.4
  • Coverage: 190.0
  • Bit_score: 245
  • Evalue 3.40e-62
30S ribosomal protein S6; K02990 small subunit ribosomal protein S6 similarity KEGG
DB: KEGG
  • Identity: 67.4
  • Coverage: 190.0
  • Bit_score: 245
  • Evalue 1.10e-62
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.4
  • Coverage: 190.0
  • Bit_score: 245
  • Evalue 4.70e-62

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Taxonomy

Hyphomicrobium denitrificans → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 585
ATGGCGCTCTACGAGCACGTGTTCCTGGCACGCCAGGACGTCTCGACCCAGCAGGTCGAGGCACTTACCAAGGAATTCTCGGACATCATCGAGGCCGGCGGCGGCAAGGTCGCCAAGTCCGAATATTGGGGTCTCAAGACCCTCAACTTCAAGATCAAGAAGAACCGCAAGGCGCATTACTCGCTCTTCAACATCGACGCCCCGCCGGCGGCAGTTGCGGAGATGGAGCGCCGCATGAGCCTGTCGACGGACATCCTCCGCTTCCTCACCGTCAAGGTCGAGGCGCACGAGACCGAGCCGTCCGCGCCGATGCGCAAGGGCGACCGCGACGAGCGCGGCGAGCGTGGTGATCGCGGCGACCGCGGTCCGCGCGGTGGCGGCGGCCGCTTCGGCGATCGCGGTGGTGACCGTGGCGGCTTCCGCGGCGATCGCGGCGATCGTCCGCCGCGCGAGGGTGGCGGCTTCCGGGCCGATCGTGGTGACCGTCCGCCGCGTGATGGCGACGCGCCGCGTGGCCCGCGTCCGCCCCGCGACGGCGATGCGCCGCGTGGTCCTCGTCCTCCCCGTCCTGATCAGGAGAGCTGA
PROTEIN sequence
Length: 195
MALYEHVFLARQDVSTQQVEALTKEFSDIIEAGGGKVAKSEYWGLKTLNFKIKKNRKAHYSLFNIDAPPAAVAEMERRMSLSTDILRFLTVKVEAHETEPSAPMRKGDRDERGERGDRGDRGPRGGGGRFGDRGGDRGGFRGDRGDRPPREGGGFRADRGDRPPRDGDAPRGPRPPRDGDAPRGPRPPRPDQES*