ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1735_curated_10

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: 13278..14534

Top 3 Functional Annotations

Value Algorithm Source
Lytic transglycosylase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SAL2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 62.5
  • Coverage: 392.0
  • Bit_score: 510
  • Evalue 1.20e-141
Lytic transglycosylase {ECO:0000313|EMBL:AHB47678.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.5
  • Coverage: 392.0
  • Bit_score: 510
  • Evalue 1.70e-141
Lytic murein transglycosylase similarity KEGG
DB: KEGG
  • Identity: 57.0
  • Coverage: 419.0
  • Bit_score: 480
  • Evalue 5.50e-133

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Hyphomicrobium nitrativorans → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1257
ATGCGCCGCACCGCCCGCCTCAGAGCTTGCGCCTTTTCCGCGCTCGCCGCCCTTACGGCGACGATCGCCCTCAGTGCCGGCGCGGAGGCAACCCCTCCGCCTCCGAGCCCGAGCAAGATGAACTGCCAGAACACCGGCAGCTTCGAGAGCTGGCTTCGCAACTTCCGTCAGGAGGCCGCCGCGGCCGGCGTCACGCGGGCGACGCTCTCCGCCGTGCTCGACGACATGACGCTCGACCAGGGCATCATCGCGCGCGACCGGCGCCAGACGTTCTTCGGGCAAAGCTTCGTCGACTTCCGCGGCAAGCTCGTCTCGCGCAATCGCATCCAGAATGGCCTGCGGCAGATGGAGCGCCACCGCGCGACCTTCGCACGCGCCGAGAAGGAATACGGCGTGCCGGCCCCGGTCATCACCGGCTTCTGGGCACTGGAGAGCGATTTCGGCGCCGGCATGGGCAAGCTCTCCGTCCTGCGCTCACTGGCGACGCTCGCCTATGACTGCCGCCGCGGCGAGATGTTCACGCGCGAGTTCATCGCCGCCCTCAAGATCATCGACCGCGGCGACCTGAAGCCTTCCGACATGATCGGCTCGTGGGCCGGCGAGCTCGGCCAGACACAGTTCCTGCCGACGCACTATCTCGCGCACGCTGTCGACTACGATGGCGATGGCCGCCGCGANNNNNNNNNNNNNNNNNCCGATGTGATCGGCTCGACGGCCGCCTATCTCAAGCACCTCGGCTGGCGCGCGGGCGAGCCCTGGCTCGAGGAAGTGCGCGCGCCGCGCAACCTGAACTGGGCCGAGGCGGATCTCACCATCCAGCATCCGCGCAGCCAGTGGGCCAAGTGGGGCGTGACGCGTGCCGACGGCAAGCCCATTCAGGCCGATGGCCTGCAGGCCTCGCTGCTCGCGCTCATGGGCCGCGACGGGCCGCTGTTCCTCGTCTACCCGAACTTCAAGGTCTATCTCGAGTGGAACCAGTCGCTGAACTACGCGACGACCGTCGGCTATCTCGCGACACGCTACGCGGGCGCGCCGGAGATGCGCGATATCGGCAAGGACATCCCGTCGCTGAGCCTCGATCAGGCCAAGGAGCTGCAGACGCTGCTCACCCGGCGCGGCCATGATGTCGGCCGCATTGACGGCATCATCGGCGCCGGCACGCGCGCGGCCGTGAAGAAGGAGCAGCTCCGCCTCGGCATGGTCGCGGATGCCTATCCGACGGCCGAGCTGATCGAGAGGCTACGCGGCAGGCAATAG
PROTEIN sequence
Length: 419
MRRTARLRACAFSALAALTATIALSAGAEATPPPPSPSKMNCQNTGSFESWLRNFRQEAAAAGVTRATLSAVLDDMTLDQGIIARDRRQTFFGQSFVDFRGKLVSRNRIQNGLRQMERHRATFARAEKEYGVPAPVITGFWALESDFGAGMGKLSVLRSLATLAYDCRRGEMFTREFIAALKIIDRGDLKPSDMIGSWAGELGQTQFLPTHYLAHAVDYDGDGRRXXXXXXXDVIGSTAAYLKHLGWRAGEPWLEEVRAPRNLNWAEADLTIQHPRSQWAKWGVTRADGKPIQADGLQASLLALMGRDGPLFLVYPNFKVYLEWNQSLNYATTVGYLATRYAGAPEMRDIGKDIPSLSLDQAKELQTLLTRRGHDVGRIDGIIGAGTRAAVKKEQLRLGMVADAYPTAELIERLRGRQ*