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SCNpilot_expt_1000_bf_scaffold_5694_curated_6

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: 6492..8741

Top 3 Functional Annotations

Value Algorithm Source
RNR; ribonuclease R (EC:3.1.13.1); K12573 ribonuclease R [EC:3.1.-.-] similarity KEGG
DB: KEGG
  • Identity: 62.9
  • Coverage: 753.0
  • Bit_score: 931
  • Evalue 2.10e-268
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895, ECO:0000313|EMBL:CCB64356.1}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895, ECO:0000313|EMBL:CCB64356.1};; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.9
  • Coverage: 753.0
  • Bit_score: 931
  • Evalue 9.40e-268
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI0003634C5E similarity UNIREF
DB: UNIREF100
  • Identity: 63.3
  • Coverage: 749.0
  • Bit_score: 940
  • Evalue 8.50e-271

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Taxonomy

Hyphomicrobium sp. MC1 → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2250
TTGCCGACGCGCGAGCAGTTGCTCGAGTATCTGTCCAGCACCACGGAGAAGGTCGGGAAGCGCGAGATCGCCCGCGCCTTCAACATTCGCGGCGAGGATCGCATCGCTCTGAAGGCCCTTCTCTCGGAGCTTGCGACCCAGGGCGCGATCGTCGGCAACCGCAAGGCCGTCAAACCGCGCGGCAAGCTCCCGCCCGTCGGCGTGCTCGAGATCATCGCACGCGATGACGAAGGCGAGCTCGTTGCCGTGCCGACGAACTGGGAAGCCTCCGAAGGCGAGCGGCCGAAGATCCTCGTGCAGGTCGCACGCCGCGGCATCGGCCCGGATGGCGACGGCGCACTCGCGATCGGCGACCGCATTCTCGCGCGCATTGCCCGCATCCGCGATACCGATCCTTTCGGCTATGCGCACGAAGCCGAGCCCATCAAGCGCCTGCCGCGCGAGAGAAAGCGCCTGCTCGGCATTTTCCGTGCCTCGAAGCGCGGTGGCGGCGGCATGATCGATCCGATCGACCGCAAGGACCTCAAGGAGTGGCCGGTCCGCGCCGGCAATGAGAGCGATGCCGATGACGGCGAGCTGGTGCGCTTCGACATCGTGCGACGGCATCGCGAAGGCGTGCCCGAAGCGCGCGTCGCCGAGCGGCTCGGCAATCCGCAGGACCAGCGCCGCATCAGCCTCATTGCCATCCACGCGCACGGTTTGCCGGACGGCTTCCCCGATCCTGTTTTGGCCGAAGCGGAAGATCTCCCCGAAATCGAGACGCACGGCCGCCTCGACCTCACTCAGTTGCCGCTCGTGACCATCGATCCCGTCGATGCGCGCGACCACGACGACGCCGTTCTTGCCGAGCCTGATGCCGATCCGGGGAATGAGGGCGGTTTCATCGTCACGGTCGCCATTGCCGACGTCGCGCATTATGTGCGCCCAGCCTCACGTCTCGATCGCGAGGCGAGGACACGCGGCAACTCGGTTTATTTCCCCGACCGCGTCGTGCCGATGCTGCCGGAGCGCATCTCCAATGACCTCTGCTCGCTGCGCGAGGGCGAGGTGCGCCCCTGTCTCGCGGCGCGCATGGTCTTCGACCGTCACGGCGACAAGCGGCGCCACACTTTCCATCGCGCGCTCATGCGCTCGGCGGCGCGGCTCTCCTATCAGGAGGCGCAGGCGGCAATCGACGGAAGCGCGGGCGCGCGCGTCGCGCCCATGCTGGAGAAGGCGCTCAAACCGCTCTGGGCTGCCTATGCTGCGCTCGCCGCCGCGCGCGACCGCCGCGCGCCACTCGATCTCGATCTTCCCGAGCGCAAGATCGAGCTCGGCGAGGATGGCATGGTCCGCCGCGTGCATGTGCCCGAGCGGCTCGACGCGCATCGCCTCATTGAAGAGTTCATGATCCAGGCGAACGTCGCCGCCGCCGAGACGCTGGAGCAGGCCCGCGCGCCCGTCGTCTATCGTGTGCACGACAGGCCGAGCACCGAGAAGCTCAAGGCTCTACGCGAGCTGCTCGAGGGCCTCGACCTCAGCCTGCCGCCCGGCGATCACATCCGCCCGAAGCACTTCAATGGCGTTCTCGCGCGTGCCAAGGACCAGCCCTATGCGGAGTTCGTCAACGAGGTGATCCTGCGCTCGCAGGCGCAGGCCGTGTACGATACCGCGAACCTCGGCCACTTCGGCTTGAACCTGCTGCGCTATGCGCACTTCACCTCGCCGATCCGTCGCTATGCCGACCTGCTCGTGCACCGCTCGCTGATCGCCGCGATGAAGCTCGGCGCCGGCGGTATGGCGCCCGAGGAAAAGCCGGAGCTCAAAGAAACGGCCAAGGCGATCTCGGAAGCCGAGCGCCGCGCCATGGTGGCCGAGCGTGAAACCATCGATCGCCTCATCAGCGCTTTTCTTGCCGACCGGGTGAACGCCGAGTTCGCCGGCCGCATCTCCGGCGTCACGCGTTCAGGACTATTCGTGCGCCTCAAGGATACGGGCGCCGACGGCTTCATCCCGGCCTCGACACTCGGCGGCGGCGAATTCTGGCGCCATGTCGAGGAGGCGCACGCGCTCATCGGCGACCGCAGCGGGCGCGGTTTCCGCCTCGGCGATCAGGTCGAAGTCCGTCTTGTCGAGGCCATTCCCATGGCGGGCGCCCTGCGCTTCGAAATGCTCACCGAGCCCGGACCGATGCCGGGTCATGCGGCGCGTGGCGGCGGCTCCCACCGGCGCGGCCCCCCCCTGGGAAATCGCCGTCATAGACGCCGCTGA
PROTEIN sequence
Length: 750
LPTREQLLEYLSSTTEKVGKREIARAFNIRGEDRIALKALLSELATQGAIVGNRKAVKPRGKLPPVGVLEIIARDDEGELVAVPTNWEASEGERPKILVQVARRGIGPDGDGALAIGDRILARIARIRDTDPFGYAHEAEPIKRLPRERKRLLGIFRASKRGGGGMIDPIDRKDLKEWPVRAGNESDADDGELVRFDIVRRHREGVPEARVAERLGNPQDQRRISLIAIHAHGLPDGFPDPVLAEAEDLPEIETHGRLDLTQLPLVTIDPVDARDHDDAVLAEPDADPGNEGGFIVTVAIADVAHYVRPASRLDREARTRGNSVYFPDRVVPMLPERISNDLCSLREGEVRPCLAARMVFDRHGDKRRHTFHRALMRSAARLSYQEAQAAIDGSAGARVAPMLEKALKPLWAAYAALAAARDRRAPLDLDLPERKIELGEDGMVRRVHVPERLDAHRLIEEFMIQANVAAAETLEQARAPVVYRVHDRPSTEKLKALRELLEGLDLSLPPGDHIRPKHFNGVLARAKDQPYAEFVNEVILRSQAQAVYDTANLGHFGLNLLRYAHFTSPIRRYADLLVHRSLIAAMKLGAGGMAPEEKPELKETAKAISEAERRAMVAERETIDRLISAFLADRVNAEFAGRISGVTRSGLFVRLKDTGADGFIPASTLGGGEFWRHVEEAHALIGDRSGRGFRLGDQVEVRLVEAIPMAGALRFEMLTEPGPMPGHAARGGGSHRRGPPLGNRRHRRR*