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SCNpilot_expt_1000_bf_scaffold_5623_curated_5

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: comp(2632..3405)

Top 3 Functional Annotations

Value Algorithm Source
Chemotaxis protein CheY n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SBY9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 69.8
  • Coverage: 225.0
  • Bit_score: 327
  • Evalue 1.50e-86
Chemotaxis protein CheY {ECO:0000313|EMBL:AHB47489.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.8
  • Coverage: 225.0
  • Bit_score: 327
  • Evalue 2.10e-86
two component transcriptional regulator PhoB, winged helix family protein similarity KEGG
DB: KEGG
  • Identity: 65.6
  • Coverage: 227.0
  • Bit_score: 314
  • Evalue 4.20e-83

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Taxonomy

Hyphomicrobium nitrativorans → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 774
GTGCGCGTTGCGACACTGAGAACGGCACGGGGACAGGCGATCCGTAGCGACGGAGCGCCGGGCGAGGCCAGGGAGGGCCGGGCTCGGATGAGCATCAGGATCCTGGTGGTCGAGGACGATCCGGCGATCGTCGAGCTCATCACCTACAACCTTGAAGCCGAGGGCTTCGAGGTCGTCGTCGCCGAGACCGGCGAGGAGGCTCAGCTCCTCATCAACGAAGAGAATTTCGACCTCGTCCTGCTCGACTGGATGCTGCCGGGCGTGTCCGGGATCGAGCTTTGCCGGCGCATGCGCCAGCGCCAGGAAACGACGGCCGTCCCCATCATCATGCTGACCGCGCGCGGCGAGGAAGGCGATCGCGTGCGCGGGCTCGCCACGGGCGCCGACGACTACATCGTCAAACCCTTCTCGATCGCGGAGCTCATTGCCCGCGTCAAGGCCATGCTGCGCCGCGCCGCGCCCGAGCGCGTCTCCGATGTGATCACGGTTGGAGATGTCTCGCTCGACCGCCTCGCCCATCGCGTGCGCCGCGCACAGCGCGAGGTCCGGCTCGGGCCGACCGAGTATCGCCTGCTCGAGTTCATGATGGAGCGGGCCGGGCGCGTTCTGAGCCGCGAGCAGATCCTCGACGGGGTCTGGGGCCGCCAGGCCGAGCTCGACGAGCGTACGGTGGATGTGCACATCGGGCGGCTGCGCAAGGCCCTGATCCGCGGCAAAGAGAGCGAGATCATCCGCACGGTCCGCGGCGCGGGCTATGTTATCGAGGCGGCCTGA
PROTEIN sequence
Length: 258
VRVATLRTARGQAIRSDGAPGEAREGRARMSIRILVVEDDPAIVELITYNLEAEGFEVVVAETGEEAQLLINEENFDLVLLDWMLPGVSGIELCRRMRQRQETTAVPIIMLTARGEEGDRVRGLATGADDYIVKPFSIAELIARVKAMLRRAAPERVSDVITVGDVSLDRLAHRVRRAQREVRLGPTEYRLLEFMMERAGRVLSREQILDGVWGRQAELDERTVDVHIGRLRKALIRGKESEIIRTVRGAGYVIEAA*