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SCNpilot_expt_1000_bf_scaffold_5215_curated_7

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: comp(4870..5784)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JVI5_HYPDA similarity UNIREF
DB: UNIREF100
  • Identity: 69.7
  • Coverage: 300.0
  • Bit_score: 401
  • Evalue 9.80e-109
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 69.7
  • Coverage: 300.0
  • Bit_score: 401
  • Evalue 3.10e-109
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADJ24839.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.7
  • Coverage: 300.0
  • Bit_score: 401
  • Evalue 1.40e-108

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Taxonomy

Hyphomicrobium denitrificans → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 915
ATGGACAAGCTCGAGGCCATGAATGCCTTCGCCAAGGTGGTCGCCCTTGGCAGCTATGCCGAGGCCGGCCGGGCGTTGGGCCTGACCCGATCCGCGGTCAGCAAGGCCGTGATGGAGTTGGAGCAGCTCCTCGGGGCCCGGCTCCTCGACCGCACGACCCGGCGCGTCAACCCGACGGAGGCCGGGCTTTCCTATTACGAGCGTTGTCTCGATATTCTCTCGCGCATCGAGGAGACGGAACTCCAAGTCTCGCGGCTCCACGACGAGCCCAAGGGGCTGCTTCGGGTCAATGCGCCCATGTCCTTCGGCACGCTCTATCTGGGCGAGGCCATTGCGGCATTCATGGCCGCTTATCCCGATCTCAATGTGGAGCTGACACTCAACGACCGCTTCATCGATCCCGTCGAGGAGGGCGTCGACGTCACCATTCGCATTGCCGCGCTTGCGGATTCGAGCCTGATCGCGCGCAAGATTGCTCGCACCCGGCGCGTGGTCGTGGCATCACCCGCCTATCTCGCGGCGCACGGAACGCCCGCGACGCCCGAGGATCTCACAAATCACCGCTGGCTTGGCTATGCCCCCGGCATGTCGCTTCAGCGCTGGTCGTATGAAAAGGCTGACGGCACTTCCGGTTCAGTGGCGCTCAAGTGCGCGCTCAGCTCCAACAACGGGCACATCCTGCGCAATGCGGCGCTCGCCGGACAAGGCATCACCGAGCTTCCGACATTTCTTGTCGGGTGCGATATCGCGGCAGGTGCTTTGACCGTCGCGCTGCCTACGCATTCGCGCAGCGAGCTGGGCATCTACGCGCTCTACACGCCGAACCGCTATCTGGCGGCCAAGACGCGCGTGTTCATCGATTTTCTTGTGGCCCGGATCGGCCCGCGTCCGGAGTGGGACCGGTTCGATGCATAG
PROTEIN sequence
Length: 305
MDKLEAMNAFAKVVALGSYAEAGRALGLTRSAVSKAVMELEQLLGARLLDRTTRRVNPTEAGLSYYERCLDILSRIEETELQVSRLHDEPKGLLRVNAPMSFGTLYLGEAIAAFMAAYPDLNVELTLNDRFIDPVEEGVDVTIRIAALADSSLIARKIARTRRVVVASPAYLAAHGTPATPEDLTNHRWLGYAPGMSLQRWSYEKADGTSGSVALKCALSSNNGHILRNAALAGQGITELPTFLVGCDIAAGALTVALPTHSRSELGIYALYTPNRYLAAKTRVFIDFLVARIGPRPEWDRFDA*