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SCNpilot_expt_1000_bf_scaffold_5215_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_5215_curated_1
unknown

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comp(3..245)
DNA (243bp) protein (81aa)
Molybdenum import ATP-binding protein ModC {ECO:0000256|HAMAP-Rule:MF_01705, ECO:0000313|EMBL:CPR19233.1}; EC=3.6.3.29 {ECO:0000256|HAMAP-Rule:MF_01705, ECO:0000313|EMBL:CPR19233.1};; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
modC; molybdate ABC transporter ATP-binding protein; K02017 molybdate transport system ATP-binding protein [EC:3.6.3.29]
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002EA03A9
SCNpilot_expt_1000_bf_scaffold_5215_curated_2
unknown

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comp(865..1554)
DNA (690bp) protein (230aa)
Molybdenum ABC transporter (Permease protein) n=1 Tax=Azospirillum brasilense Sp245 RepID=G8APG7_AZOBR
Molybdenum transport system permease protein ModB {ECO:0000313|EMBL:CPR19236.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
modB; molybdenum ABC transporter (permease protein)
SCNpilot_expt_1000_bf_scaffold_5215_curated_3
unknown

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comp(1568..2338)
DNA (771bp) protein (257aa)
Molybdenum ABC transporter periplasmic molybdate-binding protein n=1 Tax=Nitratireductor indicus C115 RepID=K2N502_9RHIZ
Molybdate-binding periplasmic protein {ECO:0000313|EMBL:CPR19239.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
molybdenum ABC transporter periplasmic molybdate-binding protein; K02020 molybdate transport system substrate-binding protein
SCNpilot_expt_1000_bf_scaffold_5215_curated_4
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2486..2845)
DNA (360bp) protein (120aa)
Putative transcriptional regulator, ModE family n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JS28_HYPDA
ModE family transcriptional regulator; K02019 molybdate transport system regulatory protein
Putative transcriptional regulator, ModE family {ECO:0000313|EMBL:ADJ22287.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
SCNpilot_expt_1000_bf_scaffold_5215_curated_5
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3046..4176)
DNA (1131bp) protein (377aa)
Cysteine desulfurase {ECO:0000313|EMBL:CDM23761.1}; EC=2.8.1.7 {ECO:0000313|EMBL:CDM23761.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
cysteine desulfurase; K04487 cysteine desulfurase [EC:2.8.1.7] rbh
cysteine desulfurase n=1 Tax=Afipia birgiae RepID=UPI00035CB0F0
SCNpilot_expt_1000_bf_scaffold_5215_curated_6
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4216..4791)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Caenispirillum salinarum AK4 RepID=K9H259_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKV31627.1}; TaxID=1238182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Caenispirillum salinarum AK4.;"
nitroreductase
SCNpilot_expt_1000_bf_scaffold_5215_curated_7
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4870..5784)
DNA (915bp) protein (305aa)
Transcriptional regulator, LysR family n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JVI5_HYPDA
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADJ24839.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
SCNpilot_expt_1000_bf_scaffold_5215_curated_8
unknown

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5912..6616
DNA (705bp) protein (235aa)
Putative Quercetin 2,3-dioxygenase {ECO:0000313|EMBL:CPR16913.1}; EC=1.13.11.24 {ECO:0000313|EMBL:CPR16913.1};; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
hypothetical protein n=1 Tax=Methylocystis parvus RepID=UPI00036B9969
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_5215_curated_9
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6744..7181
DNA (438bp) protein (146aa)
NAD(P)H dehydrogenase (quinone) {ECO:0000256|HAMAP-Rule:MF_01017, ECO:0000256|SAAS:SAAS00064138}; EC=1.6.5.2 {ECO:0000256|HAMAP-Rule:MF_01017, ECO:0000256|SAAS:SAAS00064138};; NAD(P)H:quinone oxidoreductase {ECO:0000256|HAMAP-Rule:MF_01017}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
NAD(P)H dehydrogenase (quinone) n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JVI6_HYPDA
flavoprotein WrbA; K03809 Trp repressor binding protein
Displaying 9 items

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