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SCNpilot_expt_1000_bf_scaffold_7433_curated_9

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: comp(6949..7842)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoH n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B572_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 79.0
  • Coverage: 295.0
  • Bit_score: 475
  • Evalue 5.20e-131
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961, ECO:0000313|EMBL:CPR14793.1}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.8
  • Coverage: 297.0
  • Bit_score: 490
  • Evalue 1.30e-135
RNA polymerase factor sigma-32 similarity KEGG
DB: KEGG
  • Identity: 79.0
  • Coverage: 295.0
  • Bit_score: 475
  • Evalue 1.60e-131

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Notes

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Taxonomy

No taxonomy information

Sequences

DNA sequence
Length: 894
ATGGCGACCAAAGCACTGCCGGTCGTAGCTTCAGGCTCGGCCGGCCTATCCCGCTATCTCGAGGAGATCCGTCGGTTCCCGATGCTGGAGCCGGACGAGGAGTACATGCTGGCCAAGCGCTGGCAGCAGCACGAGGATACCGAAGCTGCCCACAAGCTCGTGACATCGCATCTGCGCCTCGTCGGCCGCATTGCCATGGGCTATCGCGGTTATGGTCTTCCCATGGGCGAGGTGATTTCCGAAGGCAACGTCGGGCTCATGCAGGCGGTGAAGCGCTTCGACCCGGACAAGGGGTTCCGCCTCGCGACCTACGCCATGTGGTGGATCAGGGCCTCGATCCAGGAGTACATCCTGCGTTCGTGGAGCCTCGTGAAGATGGGCACCACGGCGTCGCAGAAGAAGCTCTTCTTCAACCTGCGCCGCGTCAAAGGCCAGATCCAGGCTCTCGACGAGGGCGAGCTCAAGCCCGATCAGGTCAAGGCGATCGCGACCAAGCTCGGCGTGAGCGAGGAGGACGTGGTCTCGATGAACCGTCGCCTGAGCGGCGACGCTTCATTGAACGCGCCCGTCCGTGCCGATGCCGACTCGGGTGAGTGGCAGGACTGGCTCGTCGACGAGACGCCCGATCAGGAGGCGCAGCTCGCCGAGAGCGAGGAGCTGGAACTGCGTCGGGGCATGCTCGGCAATGCGCTGAAGACGCTGACGGACCGCGAGCGCCAGATCTTCGAGGCCCGCCGCCTCCGGGAAGATCCGGCAACGCTCGAGGATCTCTCGGTCGAGTTCGGGGTGTCGCGCGAGCGCATTCGCCAGATTGAGGTGCGCGCCTTCGAGAAGGTCCAGCGCGCCATGCAGAAGGCCAATGCCAAGATCGAGGCGGCCGGCGCGGAGGCCTGA
PROTEIN sequence
Length: 298
MATKALPVVASGSAGLSRYLEEIRRFPMLEPDEEYMLAKRWQQHEDTEAAHKLVTSHLRLVGRIAMGYRGYGLPMGEVISEGNVGLMQAVKRFDPDKGFRLATYAMWWIRASIQEYILRSWSLVKMGTTASQKKLFFNLRRVKGQIQALDEGELKPDQVKAIATKLGVSEEDVVSMNRRLSGDASLNAPVRADADSGEWQDWLVDETPDQEAQLAESEELELRRGMLGNALKTLTDRERQIFEARRLREDPATLEDLSVEFGVSRERIRQIEVRAFEKVQRAMQKANAKIEAAGAEA*