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SCNpilot_expt_1000_bf_scaffold_3275_curated_7

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: 5037..6086

Top 3 Functional Annotations

Value Algorithm Source
tripartite tricarboxylate transporter TctA n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031E1902 similarity UNIREF
DB: UNIREF100
  • Identity: 72.3
  • Coverage: 347.0
  • Bit_score: 494
  • Evalue 7.50e-137
Uncharacterized protein {ECO:0000313|EMBL:EYR81677.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.3
  • Coverage: 353.0
  • Bit_score: 468
  • Evalue 6.20e-129
52.8 kDa protein in TAR-I ttuC' 3'region similarity KEGG
DB: KEGG
  • Identity: 67.1
  • Coverage: 350.0
  • Bit_score: 457
  • Evalue 4.20e-126

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1050
ATGATGTTCGCGTTCGCGACGCTGGCCTCCATGGTCGGCGCTGAGCCCGTGAAGACACTCATCGGCTGCCTGATCGGCCTCCTCCTCACGACCATCGGTCTCGATCCGACCTCCGGCGCCTACCGCTTCACGTTCGATCAGCCCGAGCTGCACGACGGCATCGAGTTCATCATCATCGTCATCGGCCTCTTCTCGATCAGCGAGATCCTGCTGATGCTCGAGCATCAGTTCAAAGGCACGCTCAAGCCCATTCCGATCGGCAAGGGCTTCCCGAGCTGGTCGGACATAAAGGCCTGCTGGTGGCCGACGATCCGCAGCTCCGTTTCTGGCTTCATCATCGGCGTGCTGCCGGGCACCGGCGCCTCCGTTGCAAGCGCCGTCGCCTACACCACGGAGAAACGCCTCCTCGACAAGGGCACGTTCGGCAAAGGCGACATGCGCGGGCTCGCGGCCCCCGAGGCCGCCAACAATGCCGCGGCCGGCGGCGCATTCGTGCCGATGCTGACGCTCGGCGTGCCCGGGTCGGGCACGACAGCCGTGATGCTCGGCGCGCTCATGCTCTACAACATCACACCCGGACCGCAGCTCTTCACGGAACGGCCCGAGCTCGCAGGCGGCCTCATCGCGTCGATGTACATCGGCAACATCATGCTGCTGATCCTGAACATCCCGATGGTGCGCATCTTCGTGAAGATGCTGCAGGTGCCGAATACCTGGCTCATACCGGCGATCCTGCTCCTCTCCATCCTCGGCGTGTACACGGCCTACTCGAGCGTCATGAGCGTGCTGCTCATGCTGGCGATCGGTGTCGGGGGCTGGGCGCTCAGGAAACAGGGCTTCGACATGGCCCCGATCATCCTCGGCTTCGTTCTCGGCAAAGTTCTCGAGACGAACCTGCGCAACGCGCTCGCGCTCTCCGGCGGCGACATCTCGATCCTCTTCCAGAGCACCATCTCGAATTCGCTTTGGGTCATGGCCGTGCTGATCGTGCTGCTCCCCTGGTGGCTTGCCCGCCGGACCAAGGCACGCGCGAGCGCCGAAGGGGCTTAG
PROTEIN sequence
Length: 350
MMFAFATLASMVGAEPVKTLIGCLIGLLLTTIGLDPTSGAYRFTFDQPELHDGIEFIIIVIGLFSISEILLMLEHQFKGTLKPIPIGKGFPSWSDIKACWWPTIRSSVSGFIIGVLPGTGASVASAVAYTTEKRLLDKGTFGKGDMRGLAAPEAANNAAAGGAFVPMLTLGVPGSGTTAVMLGALMLYNITPGPQLFTERPELAGGLIASMYIGNIMLLILNIPMVRIFVKMLQVPNTWLIPAILLLSILGVYTAYSSVMSVLLMLAIGVGGWALRKQGFDMAPIILGFVLGKVLETNLRNALALSGGDISILFQSTISNSLWVMAVLIVLLPWWLARRTKARASAEGA*