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SCNpilot_expt_1000_bf_scaffold_6432_curated_6

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: comp(3447..4685)

Top 3 Functional Annotations

Value Algorithm Source
mnmA; tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase; K00566 tRNA-specific 2-thiouridylase [EC:2.8.1.-] similarity KEGG
DB: KEGG
  • Identity: 68.1
  • Coverage: 360.0
  • Bit_score: 482
  • Evalue 1.40e-133
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.1
  • Coverage: 360.0
  • Bit_score: 482
  • Evalue 6.40e-133
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037E9A6B similarity UNIREF
DB: UNIREF100
  • Identity: 64.2
  • Coverage: 383.0
  • Bit_score: 484
  • Evalue 1.20e-133

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Taxonomy

Polymorphum gilvum → Polymorphum → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1239
ATGTCTGTCGCCAACCTCGATCCGGCTCGCCTCGGGCGCCTTCACGGCGTCGCCGACGGCGCGCGCGTCGTCGTGGCGATGTCGGGGGGCGTGGACAGCTCGCTCGCCGCAGCCCTCGCCAAGGCGGCCGGCTACGATGTCGTCGGCATTACGCTGCAGCTCTACGATCATGGTGCGGCCACCGGGCGCAAGGGCGCCTGCTGCGCCGGCCAGGATATTCACGACGCCCGCCGCGTCGCCGAGCACCTCGGCATTGCGCACTACGTGCTCGATTACGAGCGCCGCTTCCGCGATGCGGTCATCGCGCCGTTTGCCGAGAGTTACCTCGCCGGCGAGACGCCGATCCCGTGCGTGTCGTGCAATCAGAACATCAAGTTTTCCGGCCTTCTCGATACGGCACGCGAGATCGGGGCGGCGGCCCTGATCACGGGGCACTACGTCGACTGGCGGTTCGTCGACGGCCAGCCCACGCTCTATAGGCCGGCCGATCTCAGCCGCGACCAGAGCTATTTCCTCTTTGCCACGACGCGCGACGAGCTTGCCTTCCTGCGCTTCCCTCTTGGCGCCCTGCTGAAGTCGGAGGTGCGCGAGCTCGCCCGCGCGTTCGCCTTGCCGGTTGCCGAAAAGGCCGACAGCCAGGACATTTGCTTCGTGCCGCAGGGCCGCTACAGCGATGTCATCGAAAGGCTGAGGCCTGAGGCGGCGACGCCTGGAAACGTCGTTCATGTCGACGGGCGCGTGCTCGGCCGCCACGACGGTATCATGGGGTTCACGGTCGGCCAGCGCCGCGGGCTCGGAGTGACGGGCCGCGAGCCCCTGTACGTCGTTCGGCTCGATGCGAGCCGCGCAGAGGTCGTCGTCGGTCCGCGAGACTGCTTGCGTGTGCGCACGATTATGCTTAAAGACGTCAACTGGCTCGGCGATCAGCCGGTCGATGGCGGGGGCGCCATGCGGGAACGTGTCAGCGTACGCGTGCGTTCATCCCAAGATCCGATGTCTGCGCATCTCTCGCTCGAGGGACGTGCAGCAACGGTTGTTCTGGACGACGGAGAGTTCGGGGTGGCTCCGGGGCAAGCGTGCGTCTTCTATTCTTCCGAAACAGCGGCGCGCGTGCTCGGTGGCGGCTGGATTGCTTCGACATCAGCCGACATCGATAAGGCGGACTTCGGTGCCGCACTGCGGACAGCGGAGACCAGCGCGGGTACACGCACGGCCATTGCGGCCGGGCCCGGCAATTGA
PROTEIN sequence
Length: 413
MSVANLDPARLGRLHGVADGARVVVAMSGGVDSSLAAALAKAAGYDVVGITLQLYDHGAATGRKGACCAGQDIHDARRVAEHLGIAHYVLDYERRFRDAVIAPFAESYLAGETPIPCVSCNQNIKFSGLLDTAREIGAAALITGHYVDWRFVDGQPTLYRPADLSRDQSYFLFATTRDELAFLRFPLGALLKSEVRELARAFALPVAEKADSQDICFVPQGRYSDVIERLRPEAATPGNVVHVDGRVLGRHDGIMGFTVGQRRGLGVTGREPLYVVRLDASRAEVVVGPRDCLRVRTIMLKDVNWLGDQPVDGGGAMRERVSVRVRSSQDPMSAHLSLEGRAATVVLDDGEFGVAPGQACVFYSSETAARVLGGGWIASTSADIDKADFGAALRTAETSAGTRTAIAAGPGN*