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SCNpilot_expt_1000_bf_scaffold_6432_curated

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_6432_curated_1
unknown

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63..374
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SF58_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CPR14740.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_6432_curated_2
unknown

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474..1355
DNA (882bp) protein (294aa)
S-methyl-5'-thioadenosine phosphorylase {ECO:0000256|HAMAP-Rule:MF_01963, ECO:0000313|EMBL:CPR20010.1}; EC=2.4.2.28 {ECO:0000256|HAMAP-Rule:MF_01963, ECO:0000313|EMBL:CPR20010.1};; 5'-methylthioadenosine phosphorylase {ECO:0000256|HAMAP-Rule:MF_01963}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
5'-methylthioadenosine phosphorylase (mtnP-like) (EC:2.4.2.28); K00772 5'-methylthioadenosine phosphorylase [EC:2.4.2.28]
5''''-methylthioadenosine phosphorylase n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00035C10EE
SCNpilot_expt_1000_bf_scaffold_6432_curated_3
unknown

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comp(1409..1780)
DNA (372bp) protein (124aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6432_curated_4
unknown

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comp(1905..2285)
DNA (381bp) protein (127aa)
FHA domain-containing protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JEZ0_HYPSM
Signal peptide protein {ECO:0000313|EMBL:CPR20015.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
FHA domain-containing protein
SCNpilot_expt_1000_bf_scaffold_6432_curated_5
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2677..3393)
DNA (717bp) protein (239aa)
phosphatidylethanolamine-N-methyltransferase (pmtA) (EC:2.1.1.17)
Putative phosphatidylethanolamine-N-methyltransferase (PmtA) {ECO:0000313|EMBL:CCB64182.1}; EC=2.1.1.17 {ECO:0000313|EMBL:CCB64182.1};; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
Putative phosphatidylethanolamine-N-methyltransferase (PmtA) n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JIS6_HYPSM
SCNpilot_expt_1000_bf_scaffold_6432_curated_6
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3447..4685)
DNA (1239bp) protein (413aa)
mnmA; tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase; K00566 tRNA-specific 2-thiouridylase [EC:2.8.1.-]
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037E9A6B
SCNpilot_expt_1000_bf_scaffold_6432_curated_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4866..6560)
DNA (1695bp) protein (565aa)
FAD binding domain protein 15 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HY46_ACHXA
FAD binding domain-containing protein 15
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying 7 items

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