ggKbase home page

SCNpilot_expt_1000_bf_scaffold_4444_curated_3

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: comp(580..1146)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Burkholderia gladioli (strain BSR3) RepID=F2LQS6_BURGS similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 178.0
  • Bit_score: 161
  • Evalue 6.20e-37
RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 178.0
  • Bit_score: 161
  • Evalue 2.00e-37
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=999541 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia gladioli (strain BSR3).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.0
  • Coverage: 178.0
  • Bit_score: 161
  • Evalue 8.70e-37

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Burkholderia gladioli → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 567
ATGAAACCGCCGCCGGACGACGCGCTCGACGTTGAGCTGATGAGGGCAGTGGGCAGGCAGGATCGCCATGCCTTTGCGCGCCTCGTCGAGCGCCACTACGGCTGGGCGCTCGGCTTCACGGACCGGATGCTCGGCACGCGTCACGAGGCTGAGGACATGGTGCAGACAGCCTTCCTGCGCGTTTGGCAGGGTGCCGGGCGATGGGAACCACATGCGAAGTTCACCACGTGGCTCTATCGCGTCTTGTACAATTTGTGCGTGGACCGGCTCCGTGCGCGCCAAACGGCATCTGGCGAGCCCCTCGACGATGCGTTGGTCGAGCGGTTGGCCGATGAGGCGCCCACAGGCGAGGAGCGTATTGCGAGCCTCCAGCGCGGCGCGCGTGTCAGAGCGGCGCTGGATCAGCTTCCGGCCCGACAACGGGCGGCGCTCGTCCTCTGCTACTACGAGGAGAGATCCCAGGCGGAGGCTGCGGCACTGCTGGGTGTGAGCGCAGGTGCCTTGGAATCGCTGCTTTCACGCGGGCGCGCGACGCTCAAAAAGTGGCTTCGGGATGAATTGCAATAA
PROTEIN sequence
Length: 189
MKPPPDDALDVELMRAVGRQDRHAFARLVERHYGWALGFTDRMLGTRHEAEDMVQTAFLRVWQGAGRWEPHAKFTTWLYRVLYNLCVDRLRARQTASGEPLDDALVERLADEAPTGEERIASLQRGARVRAALDQLPARQRAALVLCYYEERSQAEAAALLGVSAGALESLLSRGRATLKKWLRDELQ*