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SCNpilot_expt_1000_bf_scaffold_4444_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4444_curated_1
unknown

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comp(2..199)
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4444_curated_2
unknown

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comp(196..570)
DNA (375bp) protein (125aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4444_curated_3
Burkholderia gladioli, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(580..1146)
DNA (567bp) protein (189aa)
RNA polymerase sigma factor n=1 Tax=Burkholderia gladioli (strain BSR3) RepID=F2LQS6_BURGS
RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=999541 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia gladioli (strain BSR3).;"
SCNpilot_expt_1000_bf_scaffold_4444_curated_4
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

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1430..1903
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00037E9EE0
(2Fe-2S)-binding domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
SCNpilot_expt_1000_bf_scaffold_4444_curated_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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1900..4002
DNA (2103bp) protein (701aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00036FD193
oxidoreductase rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
SCNpilot_expt_1000_bf_scaffold_4444_curated_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4031..4645)
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000370793A
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABJ08587.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
SCNpilot_expt_1000_bf_scaffold_4444_curated_7
Ochrobactrum sp. EGD-AQ16, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4826..5899
DNA (1074bp) protein (358aa)
Glycoside hydrolase family 43 n=1 Tax=Ochrobactrum sp. EGD-AQ16 RepID=U1XHD1_9RHIZ
Glycoside hydrolase family 43 {ECO:0000313|EMBL:ERI14320.1}; TaxID=1390361 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. EGD-AQ16.;"
secretion protein HlyD; K01993 HlyD family secretion protein
SCNpilot_expt_1000_bf_scaffold_4444_curated_8
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6575..7024
DNA (450bp) protein (150aa)
ABC transporter related protein n=1 Tax=Nitratireductor indicus C115 RepID=K2P4C9_9RHIZ
ABC transporter related protein {ECO:0000313|EMBL:EKF42216.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
ABC transporter ATP-binding protein/permease; K13926 ribosome-dependent ATPase
Displaying 8 items

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