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SCNpilot_expt_1000_bf_scaffold_10060_curated_4

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: 2649..2918

Top 3 Functional Annotations

Value Algorithm Source
Spermidine/putrescine transport protein, ABC transporter permease protein n=1 Tax=Herbaspirillum sp. GW103 RepID=I3CLB3_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 51.2
  • Coverage: 82.0
  • Bit_score: 91
  • Evalue 3.80e-16
Spermidine/putrescine transport protein, ABC transporter permease protein {ECO:0000313|EMBL:EIJ44406.1}; TaxID=1175306 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. GW103.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.2
  • Coverage: 82.0
  • Bit_score: 91
  • Evalue 5.30e-16
attA2; mannopine ABC transporter permease; K02054 putative spermidine/putrescine transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 47.0
  • Coverage: 83.0
  • Bit_score: 90
  • Evalue 2.60e-16

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Taxonomy

Herbaspirillum sp. GW103 → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 270
GTGACGTTGCCGCTGAGCTTTCCCGGTATCCTTTCCGGGGGCCTGATCGTGTTCTCGCTGTCGGCCGCAGCGTTCGTCACGCCCTACGTAATCGGTGGCAATCGCGTCAAGGTCGTACCTCTGCAGATATACAATGCAGCCGTCACAACCTTCGACTGGCCCATGGCCGCGACGCTAAGCATCGTCTTGCTCATCCTATCCATTCTTCTGACGACAGCAGTCGCTCGCCTCACGGAGCGGCGCTTTGCGGCGTGGCTGGGGGGCTCATGA
PROTEIN sequence
Length: 90
VTLPLSFPGILSGGLIVFSLSAAAFVTPYVIGGNRVKVVPLQIYNAAVTTFDWPMAATLSIVLLILSILLTTAVARLTERRFAAWLGGS*