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SCNpilot_expt_1000_bf_scaffold_10060_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_10060_curated_1
Geobacillus thermodenitrificans, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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2..1003
DNA (1002bp) protein (334aa)
hypothetical protein n=1 Tax=Brevibacillus sp. phR RepID=UPI000301D948
ABC transporter substrate-binding protein; K02055 putative spermidine/putrescine transport system substrate-binding protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ABO68570.1}; TaxID=420246 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus thermodenitrificans (strain NG80-2).;"
SCNpilot_expt_1000_bf_scaffold_10060_curated_2
Burkholderia ambifaria, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1116..1589)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Burkholderia ambifaria IOP40-10 RepID=B1FAB2_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EDT05454.1}; TaxID=396596 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia ambifaria IOP40-10.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_10060_curated_3
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2050..2586
DNA (537bp) protein (179aa)
Putative ABC spermidine/putrescine transporter permease protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EEJ4_BRASB
ABC spermidine/putrescine transporter permease
Putative ABC spermidine/putrescine transporter permease protein {ECO:0000313|EMBL:ABQ34588.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
SCNpilot_expt_1000_bf_scaffold_10060_curated_4
Herbaspirillum sp. GW103, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2649..2918
DNA (270bp) protein (90aa)
Spermidine/putrescine transport protein, ABC transporter permease protein n=1 Tax=Herbaspirillum sp. GW103 RepID=I3CLB3_9BURK
Spermidine/putrescine transport protein, ABC transporter permease protein {ECO:0000313|EMBL:EIJ44406.1}; TaxID=1175306 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. GW103.;"
attA2; mannopine ABC transporter permease; K02054 putative spermidine/putrescine transport system permease protein
SCNpilot_expt_1000_bf_scaffold_10060_curated_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2915..3694
DNA (780bp) protein (260aa)
ABC transporter permease n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002E45CE2
ABC transporter permease protein {ECO:0000313|EMBL:KFC76060.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
binding-protein-dependent transport systems inner membrane component; K02053 putative spermidine/putrescine transport system permease protein
SCNpilot_expt_1000_bf_scaffold_10060_curated_6
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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4547..5140
DNA (594bp) protein (198aa)
amidohydrolase; K01465 dihydroorotase [EC:3.5.2.3]
dihydroorotase n=1 Tax=Agromyces italicus RepID=UPI0003B60056
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
SCNpilot_expt_1000_bf_scaffold_10060_curated_7
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5154..6167
DNA (1014bp) protein (338aa)
NADPH:quinone reductase; K00344 NADPH2:quinone reductase [EC:1.6.5.5]
Zn-dependent oxidoreductase, NADPH:quinone reductase n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QCB0_9BRAD
Zn-dependent oxidoreductase, NADPH:quinone reductase {ECO:0000313|EMBL:EIG57416.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
SCNpilot_expt_1000_bf_scaffold_10060_curated_8
unknown

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comp(6504..6749)
DNA (246bp) protein (82aa)

This feature has no annotations

Displaying 8 items

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