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SCNpilot_expt_1000_bf_scaffold_1547_curated_20

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: comp(18423..19040)

Top 3 Functional Annotations

Value Algorithm Source
Ligand-gated channel protein n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SBC1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 59.2
  • Coverage: 206.0
  • Bit_score: 249
  • Evalue 2.50e-63
Ligand-gated channel protein {ECO:0000313|EMBL:AHB47803.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.2
  • Coverage: 206.0
  • Bit_score: 249
  • Evalue 3.50e-63
TonB-dependent siderophore receptor; K02014 iron complex outermembrane recepter protein similarity KEGG
DB: KEGG
  • Identity: 51.2
  • Coverage: 205.0
  • Bit_score: 207
  • Evalue 5.80e-51

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Taxonomy

Hyphomicrobium nitrativorans → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 618
TTGTTCCGCACGGAGAAGCACAGGGTCGCCTATTCTGCCACGGCCGCCAACGTGGGGGCGGGTGAGGCCGCGGCGATTGGCAACCCCATCTACGGCAAGCAGATCGTGGAGGGGCTCGAACTGGCGGTCGCAGGCAATCTGACAGAGCGCTGGAAGCTGTTCGGCGGACTCGCGTTGATCGACAGCGAGCGCAAGCACGGGGCAGCAGTTGACCGGACGCAGACGGCTACCGACTACACCGTGAATGGCGTCGTGGTCACCACGACGAACGGGCAGGAGCTTGCGTTCACGCCAAGGTTCACCGCGAACCTCTGGTCGACCTACAAGGTGACGGATGCCTTTACTGTCGGCGCTGGCTTCCAGTACGTCGGCGAGTCGTGGGCCGGCCGTCCGGATGATGCCACGCGCATCATCGCAAACGGTAGGTTCGGCAAGCTCCCGGACTACTTCGTCGTGAATGCCATGGCATCCTACGATTTGACGCAGAACATCACACTTCGTCTGAACGTGGACAACGTTTTCGACGAATTCTATGCGACGTCGATGAACTGGCCAGGGGTGCGTGCGGCGCTTGGCCCACCTCGCACCTACTGGCTGAGCGCGAGCTTCAAGTACTAA
PROTEIN sequence
Length: 206
LFRTEKHRVAYSATAANVGAGEAAAIGNPIYGKQIVEGLELAVAGNLTERWKLFGGLALIDSERKHGAAVDRTQTATDYTVNGVVVTTTNGQELAFTPRFTANLWSTYKVTDAFTVGAGFQYVGESWAGRPDDATRIIANGRFGKLPDYFVVNAMASYDLTQNITLRLNVDNVFDEFYATSMNWPGVRAALGPPRTYWLSASFKY*