ggKbase home page

SCNpilot_expt_1000_bf_scaffold_5641_curated_8

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: 5900..6244

Top 3 Functional Annotations

Value Algorithm Source
Thiamine biosynthesis protein ThiS n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B670_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 56.9
  • Coverage: 65.0
  • Bit_score: 74
  • Evalue 6.10e-11
Uncharacterized protein {ECO:0000313|EMBL:KAI95160.1}; TaxID=858455 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium udaipurense JA643.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.4
  • Coverage: 65.0
  • Bit_score: 76
  • Evalue 3.80e-11
thiamine biosynthesis protein ThiS similarity KEGG
DB: KEGG
  • Identity: 56.9
  • Coverage: 65.0
  • Bit_score: 74
  • Evalue 1.90e-11

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodomicrobium udaipurense → Rhodomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 345
ATGCGCCGTGTGCATCGCAGCCTCAGCGCCGCCGGGCAGGAATTGACCCTATATTTACCGAGAGAGGCCGTTTTCTCCTGGCAGCACGAGCGTATATTCTCGGGCGGCGGGAGCGGGTGGGAGTTAACTCTGAGGATGGCTGCGGTGCTGGAGGTGGTTGTCAACGGCGAGCGAGCGAAGACGCGGGCCCGGACCCTGGCCGAGCTGCTCATCGAGCTCGGCTATGGTGAGGCCAAGGTCGCAACCGCGCGCAACGGTGATTTTATCCCCCTCCGCAAGCGGGATACGGTCGAGCTTTCTGGCGGCGATACGATCGAGATCGTGTCACCGAGACAGGGCGGGTGA
PROTEIN sequence
Length: 115
MRRVHRSLSAAGQELTLYLPREAVFSWQHERIFSGGGSGWELTLRMAAVLEVVVNGERAKTRARTLAELLIELGYGEAKVATARNGDFIPLRKRDTVELSGGDTIEIVSPRQGG*