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SCNpilot_expt_1000_bf_scaffold_6507_curated_8

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: 5450..6619

Top 3 Functional Annotations

Value Algorithm Source
Extracellular ligand-binding receptor n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LYK9_HALO1 similarity UNIREF
DB: UNIREF100
  • Identity: 29.7
  • Coverage: 391.0
  • Bit_score: 183
  • Evalue 3.20e-43
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 29.7
  • Coverage: 391.0
  • Bit_score: 183
  • Evalue 9.90e-44
Extracellular ligand-binding receptor {ECO:0000313|EMBL:ACY17875.1}; Flags: Precursor;; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 29.7
  • Coverage: 391.0
  • Bit_score: 183
  • Evalue 4.40e-43

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Taxonomy

Haliangium ochraceum → Haliangium → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1170
GTGACGACGCGCTTCAATACGATAACCGGAAGGCAGCCCTCGCGGCTGCCTTTTGGTTTTGTGGCGCTCGGCGTGCTCGGCGCGCTCGTCGGTGCAGCAATGCTTGCAGGAAGGCCGGCAATAGCGCAGGTCTCGAATGGCGACGTCGTGATCCTGGCCGTCGACTCGAGCCGCATTCCCGAGCCCGACGGCGCGGGCCATCGCGTCGCGCTGCGGCCGGTCGGCGATGGTGTCGAGGAAGTTGCCCGCGATCTCAATCAGCGCGGCGGCCTGCTGGGACGCCGTGTGCGCGTCACTCATGAGAACGACCAGTGCGAGGCCGAGGAAGCGGCCGTCATTGCCGCGCGCGCCGTTGCGAACGGCGTCAGCGTGGTGATCGGGCACCCGTGCTCGAGCGGCGCGATCAAGGCGGCGGCCCTCTACGCCCAGGCCGGCATTCTCATGATCGCGACCGGGCCGCGCCATCCACGCCTGACCAGCCCGGTGGCGCATCGCGGCATCTTCCGCCTCGCCGGACGTGATGATCGCCAGGACGAGAGCATCGCCACGCTGATCGCCGCGCGCTTCCCGACCGCGCGGGCGGCGATCATCCATGACCGCAGTGTTCAAGGGCGGGGCATGGCCGAGGAGATCCGGCGCAGCATGATCGCGGCGCAGGTGCCGCCGGCGCTGGTCGCGACGTACACCTCGGGCATCAAGGACCATGCAGCCATCGTCAGCGAGCTCGCCAAGGCCAAGGCGGATCTCGTCGTGTTCCCCGGCCAGTCCTTCGAGGCATCGATGATCCTCGATCAGGCCGATCGCGCGGGCGCGCGGATCGCGACGGCCATTGGCACGGATGTGCTGGCAGCCGACAGGCCGCCGGCGCGGCTGCTTGCGGCTGTTGATGCCTTCCTCGTCATGCTGCCGTGGCCCGGCACGGGCGAAGGTGCCGGCGGAGAGAAAAGTGAGAGCACGGCGCACGAGCTTGCCGCTGCCGCACTCGAAGTGTGGGCGGCAGCCGTCGTCGAAAGCGGGAGCCTTGCCACGGATCGCATCACCGGGGTGCTCGAGGCATCAGCGCATCCAACGCGCGTTGGCGCCGTGCGCTTTGATGCCAAGGGCGATGCCGTGGTGCCGTCATACCTGCCGCACGTATGGCGGGATGGCCGCTGGCAGGCGTGGCACTGA
PROTEIN sequence
Length: 390
VTTRFNTITGRQPSRLPFGFVALGVLGALVGAAMLAGRPAIAQVSNGDVVILAVDSSRIPEPDGAGHRVALRPVGDGVEEVARDLNQRGGLLGRRVRVTHENDQCEAEEAAVIAARAVANGVSVVIGHPCSSGAIKAAALYAQAGILMIATGPRHPRLTSPVAHRGIFRLAGRDDRQDESIATLIAARFPTARAAIIHDRSVQGRGMAEEIRRSMIAAQVPPALVATYTSGIKDHAAIVSELAKAKADLVVFPGQSFEASMILDQADRAGARIATAIGTDVLAADRPPARLLAAVDAFLVMLPWPGTGEGAGGEKSESTAHELAAAALEVWAAAVVESGSLATDRITGVLEASAHPTRVGAVRFDAKGDAVVPSYLPHVWRDGRWQAWH*