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SCNpilot_expt_1000_bf_scaffold_20832_curated_3

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: comp(998..1207)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L30 n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9DCK1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 73.1
  • Coverage: 67.0
  • Bit_score: 101
  • Evalue 2.80e-19
Ribosomal protein L30, bacterial/organelle {ECO:0000313|EMBL:AKI00912.1}; TaxID=1620421 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. IMCC20628.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.1
  • Coverage: 67.0
  • Bit_score: 102
  • Evalue 3.00e-19
rpmD; 50S ribosomal protein L30; K02907 large subunit ribosomal protein L30 similarity KEGG
DB: KEGG
  • Identity: 79.7
  • Coverage: 59.0
  • Bit_score: 97
  • Evalue 2.20e-18

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Taxonomy

Hoeflea sp. IMCC20628 → Hoeflea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 210
ATGGCAGACGGCAAGAGCGGCGCCGGCAAGACGATCACCGTCGAGCAGATCGCAAGCCCCACGCGGCGCCCTGACATCCAGCGCCAGACCCTCATCGGTCTCGGCCTCAACAAGCTGCACCGCCGGCGCACGCTCGTCGATACGCCGGACGTGCGCGGCATGATCAACAGGATCCCGCACCTCGTCAGGATCGTCGAAGAGACGAAATAA
PROTEIN sequence
Length: 70
MADGKSGAGKTITVEQIASPTRRPDIQRQTLIGLGLNKLHRRRTLVDTPDVRGMINRIPHLVRIVEETK*