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SCNpilot_expt_1000_bf_scaffold_20832_curated_4

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: comp(1338..1811)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S5 n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=RS5_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 81.9
  • Coverage: 149.0
  • Bit_score: 239
  • Evalue 2.60e-60
30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 similarity KEGG
DB: KEGG
  • Identity: 81.9
  • Coverage: 149.0
  • Bit_score: 239
  • Evalue 8.10e-61
30S ribosomal protein S5 {ECO:0000255|HAMAP-Rule:MF_01307}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.9
  • Coverage: 149.0
  • Bit_score: 239
  • Evalue 3.60e-60

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Taxonomy

Parvibaculum lavamentivorans → Parvibaculum → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 474
GTGGCACGCAATCCCTCCCGTGACCGGGACCGCGACGACGATCGCAAGAGCGATTTCACCGAGAAGCTCGTCCACATCAACCGCGTCGCCAAGGTTGTGAAGGGCGGCAAGCGCTTCGGTTTCGCGGCGCTCGTGGTCGTCGGCGATCAGCAGGGTCAGGTCGGCTTCGGCCATGGCAAGGCACGCGAAGTGCCGGAAGCCATCCGCAAGGCCGGCGAGGCCGCGCGCCGCGCGATGCTGCGCGTGCCGATGCGCGACAAGCGCACGCTGCACCATGACTGCAAGGGCCGTCATGGCGCTGGCCGCGTCGTTCTGCGGGCGGCACCTCCAGGCACCGGCATCATCGCCGGCGGTCCGATGCGCGCCGTGTTCGATGCGCTCGGCGTGCGCGACGTCGTCGCGAAGTCGCTCGGCTCGTCGAACCCCTACAACATGGGTCGCGNNNNNNNNNNNNNNNNNNNNGCAAGAAGGTGA
PROTEIN sequence
Length: 158
VARNPSRDRDRDDDRKSDFTEKLVHINRVAKVVKGGKRFGFAALVVVGDQQGQVGFGHGKAREVPEAIRKAGEAARRAMLRVPMRDKRTLHHDCKGRHGAGRVVLRAAPPGTGIIAGGPMRAVFDALGVRDVVAKSLGSSNPYNMGRXXXXXXXARR*