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SCNpilot_expt_1000_bf_scaffold_5876_curated_2

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: 507..1550

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.0
  • Coverage: 344.0
  • Bit_score: 418
  • Evalue 7.30e-114
pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] similarity KEGG
DB: KEGG
  • Identity: 56.7
  • Coverage: 342.0
  • Bit_score: 379
  • Evalue 1.40e-102
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00035F48C2 similarity UNIREF
DB: UNIREF100
  • Identity: 60.9
  • Coverage: 345.0
  • Bit_score: 421
  • Evalue 6.10e-115

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Taxonomy

Hyphomicrobium nitrativorans → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1044
ATGACCGCCCCGGAAGACATCCGCACGATCGAGATCACCGAGGCCGACGCCGGCCGGAGGCTCGATCGCGTGCTCGGCAGCCATATTGCTGAGCTTTCGCGTGCGCGCCTGCAGGCACTCATCAAGCAAGGCCACGTGACGGGCGCGCGCGGGACGATAGAAGAGCCCGGCCTGAGGGTCAAACCGGGCGAGCGCTATGTCGTCGCCGTGCCGCCGCCGGAGCCTGCAGAACCGCAGCCGGAATATACAAGCCTCGCCATCGTTCATGAGGATGGCGACCTCATTGTCGTCGACAAACCCGCCGGCATGGTCGTCCACCCGGCGCCCGGTCATGCCGGCGGGACCTTGGTCAACGCGCTCATCGCGCATTGCGGCGACAGCCTCTCGGGGATCGGTGGCGTGCGCCGGCCGGGGATCGTGCACCGTCTCGACAAGGACACGAGCGGCCTGCTGGTCGTCGCGAAGTCGGACACCGCGCACCGCGGGCTTTCCGAGCAGTTTGCAGCCCATGGCAGTGACGGGCGGCTCTCGCGCCGCTACGTGGCGCTCGTCTGGGGGGCGCCGGATCGGCCGCGAGGCGCCATCGATGCGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCTCGCAGGGGCCTACCGCGCGTCATGCCGTGACGCACTACGGCGTGCTCGAAATCTTCCGCGATGAGAGCGGCACGCCGATCGCGAGCCTCATCGAGCTGGAGCTGGAGACCGGCCGCACGCACCAGATCCGCGTGCACCTCGCACACATGGGTCATCCCGTGCTCGGCGACCCGGTCTATGGCAGCGGCTTCAAGTCGAGCTCGAAGCGGCTCAACGAGAAGGCGCAGAAGGCCCTCGCGGAGCTCGATCGTCAGGCGCTGCACGCGGCAGGCCTCGGCTTCGAGCATCCGGTGACGGGAAAGCGCCTCAGCTTCGAGAGCCCGCTGCCCGCGGATTTTTCTGCAGTGCTCGAAGCGCTGCGCGGGCCGACAGCCAAAAAGCCGGCACCGCGGAAAGGCCGATCAAAATGA
PROTEIN sequence
Length: 348
MTAPEDIRTIEITEADAGRRLDRVLGSHIAELSRARLQALIKQGHVTGARGTIEEPGLRVKPGERYVVAVPPPEPAEPQPEYTSLAIVHEDGDLIVVDKPAGMVVHPAPGHAGGTLVNALIAHCGDSLSGIGGVRRPGIVHRLDKDTSGLLVVAKSDTAHRGLSEQFAAHGSDGRLSRRYVALVWGAPDRPRGAIDAXXXXXXXXXXXXXISQGPTARHAVTHYGVLEIFRDESGTPIASLIELELETGRTHQIRVHLAHMGHPVLGDPVYGSGFKSSSKRLNEKAQKALAELDRQALHAAGLGFEHPVTGKRLSFESPLPADFSAVLEALRGPTAKKPAPRKGRSK*