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SCNpilot_expt_1000_bf_scaffold_5876_curated

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_5876_curated_1
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(70..456)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SHS1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:AHB50088.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_5876_curated_2
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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507..1550
DNA (1044bp) protein (348aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00035F48C2
SCNpilot_expt_1000_bf_scaffold_5876_curated_3
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1556..2134)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11MA2_MESSB
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
SCNpilot_expt_1000_bf_scaffold_5876_curated_4
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2134..2523)
DNA (390bp) protein (130aa)
FeS assembly scaffold SufA n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SG16_9RHIZ
FeS assembly scaffold SufA {ECO:0000313|EMBL:AHB49447.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
iron-sulfur cluster assembly accessory protein; K13628 iron-sulfur cluster assembly protein
SCNpilot_expt_1000_bf_scaffold_5876_curated_5
Pseudogulbenkiania sp. NH8B, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2647..3852)
DNA (1206bp) protein (402aa)
Major facilitator superfamily transporter n=1 Tax=Pseudogulbenkiania sp. (strain NH8B) RepID=G2IXN0_PSEUL
major facilitator superfamily transporter
Major facilitator superfamily transporter {ECO:0000313|EMBL:BAK77963.1}; TaxID=748280 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenkiania sp. (strain NH8B).;"
SCNpilot_expt_1000_bf_scaffold_5876_curated_6
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3849..4769)
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Thalassospira lucentensis RepID=UPI0003B54772
Uncharacterized protein {ECO:0000313|EMBL:KGF70502.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
permease
SCNpilot_expt_1000_bf_scaffold_5876_curated_7
unknown

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4954..5178
DNA (225bp) protein (75aa)

This feature has no annotations

Displaying 7 items

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