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SCNpilot_expt_1000_bf_scaffold_3511_curated_26

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: 23409..23600

Top 3 Functional Annotations

Value Algorithm Source
TRAP transporter, 4TM/12TM fusion protein id=4656181 bin=GWF2_Methylomirabilis_70_14 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 53.1
  • Coverage: 64.0
  • Bit_score: 81
  • Evalue 3.60e-13
TRAP transporter, 4TM/12TM fusion protein similarity KEGG
DB: KEGG
  • Identity: 46.2
  • Coverage: 65.0
  • Bit_score: 68
  • Evalue 7.60e-10
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51 similarity UNIPROT
DB: UniProtKB
  • Identity: 63.1
  • Coverage: 65.0
  • Bit_score: 88
  • Evalue 4.20e-15

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Taxonomy

BJP_08E140C01_10KDA_Burkholderiales_65_51 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 192
GTGAAGCTCGGCGCCACGGGCTACATCGTGCCGTTCATGTGCGTCTATTCCACGGCCCTGATGCTCATGGGGCCCTGGCAGGACGTCCTTCTCGCAGCGGTAACGGCGTCGATCGGTGTGGTCTGCCTCGCGGCCGGCCTGCACGCGTATTTCATCAAGCCTGCGAAATGGTGGGAGCGACTGATGCTTCTC
PROTEIN sequence
Length: 64
VKLGATGYIVPFMCVYSTALMLMGPWQDVLLAAVTASIGVVCLAAGLHAYFIKPAKWWERLMLL