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SCNpilot_expt_1000_bf_scaffold_13733_curated_4

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: comp(2511..3623)

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydrogenase (EC:1.1.1.85); K00052 3-isopropylmalate dehydrogenase [EC:1.1.1.85] similarity KEGG
DB: KEGG
  • Identity: 72.9
  • Coverage: 369.0
  • Bit_score: 542
  • Evalue 1.40e-151
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.9
  • Coverage: 369.0
  • Bit_score: 542
  • Evalue 6.10e-151
3-isopropylmalate dehydrogenase n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000370F1E2 similarity UNIREF
DB: UNIREF100
  • Identity: 76.2
  • Coverage: 369.0
  • Bit_score: 563
  • Evalue 1.40e-157

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Taxonomy

Hyphomicrobium denitrificans → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1113
ATGGCGACTCATAACCTGCTCCTCCTCTCCGGCGACGGCATTGGCCCCGAGGTCATGGCCGAGGTCGACCGCCTCGTCGCCTTCCTTGCCAAGAAGAGCAAGGTGGAGTTCAAGACCGAGCAGGCGCTCTGCGGCGGGTGCTCCATCGACAAGCACGGCACGCCGCTCACCGAGGAAGTCCTCGCCAAGGCCAAGGCCGCCGACGCCATCATCTTCGGCTCCGTCGGCGGGCCGAAGTGGGACAAGGTCGCCTACGAGATCCGCCCCGAGGCCGGCCTGCTGCGCCTCCGCAAGGAGCTGGACCTCTTCGCCAACCTGCGCCCGGCCATTTGCTATCCGGCGCTCGCCGAGGCTTCGAGCCTCAAGCGCGAGCTGGTCGAAGGCCTCGACATCCTCATCCTGCGCGAGCTGACCGGCGGCACGTACTTCGGTGAGCCGAAGGAGATCGTGACGCTCGAGAACGGCCAGAAGCGCGCGGTCGACACGACGGTCTACACGACGCACGAGATCGAGCGCATTGCCCGCGTCGCCTTCGATCTGGCGAGGAAGCGCAAGAACAAGGTCCACTCCGCCGAGAAGCGCAACGTCATGAAGACGGGCGTGCTGTGGAACCAGGTCGTGACGGCCGTCCACGCCGCTGAGGCCAAGGACGTCGAGCTGCAGCACATTCTCGCCGATGCCTGCTCCATGCAGCTCGTGCGCAATCCGAAGCAGTTCGACGTGATCGTGTGCGACAATCTCTTCGGCGACATGCTCTCCGATCAGGCCGCGATGCTCGCCGGCTCGCTCGGGATGCTGCCCTCGGCGTCGCTCGGTGCGCCCGATCCGAAGACCGGCCTGCGCAAGGCACTCTACGAGCCGATCCACGGCTCGGCCCCCGACACCGCTGGCAAGGGCATCGCGAACCCGATCGCGCAGATGGCGTCCTTCGGCATGGCGCTGCGTTACTCCTGCAACATGGTCAAGGAAGCGGACCTGCTCGACAAGGCGATCGCCAACACGCTCGCCCAGGGCTATCGCACGGCCGACATCATGCAGCCGAACATGCGCAGCGTCGGCACGACCGAGATGGGCAAGGCCATCGTCACCGAGCTGGAGCGCCTCATCGGCTAA
PROTEIN sequence
Length: 371
MATHNLLLLSGDGIGPEVMAEVDRLVAFLAKKSKVEFKTEQALCGGCSIDKHGTPLTEEVLAKAKAADAIIFGSVGGPKWDKVAYEIRPEAGLLRLRKELDLFANLRPAICYPALAEASSLKRELVEGLDILILRELTGGTYFGEPKEIVTLENGQKRAVDTTVYTTHEIERIARVAFDLARKRKNKVHSAEKRNVMKTGVLWNQVVTAVHAAEAKDVELQHILADACSMQLVRNPKQFDVIVCDNLFGDMLSDQAAMLAGSLGMLPSASLGAPDPKTGLRKALYEPIHGSAPDTAGKGIANPIAQMASFGMALRYSCNMVKEADLLDKAIANTLAQGYRTADIMQPNMRSVGTTEMGKAIVTELERLIG*