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SCNpilot_expt_1000_bf_scaffold_3439_curated_15

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: comp(13341..13901)

Top 3 Functional Annotations

Value Algorithm Source
def; peptide deformylase (EC:3.5.1.88); K01462 peptide deformylase [EC:3.5.1.88] similarity KEGG
DB: KEGG
  • Identity: 66.1
  • Coverage: 177.0
  • Bit_score: 243
  • Evalue 6.60e-62
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.1
  • Coverage: 177.0
  • Bit_score: 243
  • Evalue 2.90e-61
Peptide deformylase n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JBI2_HYPSM similarity UNIREF
DB: UNIREF100
  • Identity: 66.1
  • Coverage: 177.0
  • Bit_score: 243
  • Evalue 2.10e-61

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Taxonomy

Hyphomicrobium sp. MC1 → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 561
ATGACAATTGACCAGCACGGCGCGGTTGCCTATCTGAGCGGCATGGCCAAGCTACCGATCATTATCCTCCCCGACCCCATTCTCCGCCAGCCGTCCGCGCCAATTGAACGCGTCGACGACGAGCTGAATAGGTTGGTCGACGACATGCTGGAAACCATGTACGCGGCGCCGGGCGTGGGGCTCGCCGCCGTGCAGGTGGGCGTGCCGCGCCGTCTGCTGGTCCTCGACGTCAGCGACAAGGACGACGAGAAGCAGCCCATCGCCATGATCAATCCCGAGATCCTGTCACTCGGCGGCGAGATGCGCGTGCACGAGGAAGGCTGCCTCTCCATTCCCGATGTGCGGATCGAGATCGAGCGGCCATCATCACTGGCCGTGCGCTACACGGACCGGACGGGCGCGCGCCAGGAGCTGACGGCAGACGGTCTGCTCGCGACCGCCATCCAGCACGAGATGGATCATCTCGACGGCAAGCTGATCATCGACTTTCTGACCCGCCTGAAGCGTGACATGATCGTCCGCCGCTTCCGCAAGCAGGCGAAGGACGGCCCTGCGGTCTGA
PROTEIN sequence
Length: 187
MTIDQHGAVAYLSGMAKLPIIILPDPILRQPSAPIERVDDELNRLVDDMLETMYAAPGVGLAAVQVGVPRRLLVLDVSDKDDEKQPIAMINPEILSLGGEMRVHEEGCLSIPDVRIEIERPSSLAVRYTDRTGARQELTADGLLATAIQHEMDHLDGKLIIDFLTRLKRDMIVRRFRKQAKDGPAV*