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SCNpilot_expt_1000_bf_scaffold_6729_curated_10

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: comp(8003..9352)

Top 3 Functional Annotations

Value Algorithm Source
MATE efflux family protein n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I0T5_RHOVT similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 438.0
  • Bit_score: 403
  • Evalue 2.20e-109
DNA-damage-inducible protein F {ECO:0000313|EMBL:CPR18632.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.8
  • Coverage: 441.0
  • Bit_score: 426
  • Evalue 5.90e-116
MATE efflux family protein; K03327 multidrug resistance protein, MATE family similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 438.0
  • Bit_score: 403
  • Evalue 7.00e-110

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Notes

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Taxonomy

No taxonomy information

Sequences

DNA sequence
Length: 1350
ATGCATGAGCACGTGAAGGCCCATGCGGCGGGCGAAACCGTCACGCACGCGAGCCTGCTCAAGATCGCGGTGCCGATCACGCTCTCGAATGCGACGGTGCCCCTCATCGGCTACGTCGATACCGCCGTCATCGGCCAGCTCGGCCAGGCGCACCTGATCGGCGCTGTGGGCATCGGCGGCGTCATCTTCAGTGTCCTCTACTGGACGTTCAGCTTCCTGCGCATGGGGACGACCGGCCTCACCGCACAGGCTTATGGCGCCCGCGATGGGCGCGAGATCGCGGGACATCTGCTGCGGGCGCTCGGCGCCGCGGTGGTCTTCGGGGGGGTGCTCGTCATCCTGCAGGGGCCGATCGCGAAGGCAGCCTTCTGGCTGATCGGCCCCTCACGCGAGGCCGAAGCAGCGGCGCAGACCTATTTCTCGATCCGCATCTGGGCGGCCCCGGCAGGGCTCGTGAATTTCGCACTGCTCGGCTGGTACATCGGGCTCGGGCGCGCAGGCGTGGCGTTCTTCGTCCAGCTCGTGATCAACGTGCTGAACATGGTGTTGGCGATCCTGTTCGTGCTTTGGCTCGGCGGCGGTGTCGCGGGAGTCGGCTATGCGGCGCTGATCGCGGAGTGCGCCGGCGCGGTGCTGGGGCTTGTGATTGCGCTCCGTATTGCACGCGAGATGGGAGCGTCCGCGCCGCTCGCCGATGGCCTCGATTGGCTGAAGATGAAGCGCTCGCTCGGCATCAATGCCGATCTTACTGTGCGCGCGGTCGGGCACTACTCGGCGATCATGTTCTTCACGGCGCAGGGTGCAGCCGGCGGCGATGTCATCCTCGCGGCCAACGCGATCCTGATGACGCTGATCAACATCATGGTCTACCTGCTCGACGGCTTCGCCTTTGCGGCGGAGTCGCTCGTCGGGCGCGCGGTCGGCGCGCGGGACAAGCGGTCGTTCTGGCGGGCGGTACTTCTGTCCACCGAGTGGGCGGGTGTGCTCGCCGTGCTGATCGGCGGCGGGCTCTGGTTTGCAGGGCCGGCGATCATCGAGCTCACGGCCAAAAGCGCCGAGGTGCAGCAGGCGGCCGGCACCTATCTCATGTGGGCGGCAATCGCGCCGATGCTCGGTGTGTGGTGCTTTCAGCTCGATGGCATTTTCACGGGCGCGACGCGCACGCGCGACATGCGCAATACCATGGTGTTGAGCCTCATTCCGTTCTTCGCGGTCTGGTGGCTCCTCGCGCCGCACTTCGGCAATCACGGCCTATGGGCGGCGTTCATGGTGTTCTACGTAGCACGCGCGTCGTCGTTGCTCGCGTTCATGCCGGCGCTCGTGCGGGCCTCTTTCCCCGAGAAGGTGTGA
PROTEIN sequence
Length: 450
MHEHVKAHAAGETVTHASLLKIAVPITLSNATVPLIGYVDTAVIGQLGQAHLIGAVGIGGVIFSVLYWTFSFLRMGTTGLTAQAYGARDGREIAGHLLRALGAAVVFGGVLVILQGPIAKAAFWLIGPSREAEAAAQTYFSIRIWAAPAGLVNFALLGWYIGLGRAGVAFFVQLVINVLNMVLAILFVLWLGGGVAGVGYAALIAECAGAVLGLVIALRIAREMGASAPLADGLDWLKMKRSLGINADLTVRAVGHYSAIMFFTAQGAAGGDVILAANAILMTLINIMVYLLDGFAFAAESLVGRAVGARDKRSFWRAVLLSTEWAGVLAVLIGGGLWFAGPAIIELTAKSAEVQQAAGTYLMWAAIAPMLGVWCFQLDGIFTGATRTRDMRNTMVLSLIPFFAVWWLLAPHFGNHGLWAAFMVFYVARASSLLAFMPALVRASFPEKV*