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SCNpilot_expt_1000_bf_scaffold_2500_curated_4

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: 1744..2106

Top 3 Functional Annotations

Value Algorithm Source
tRNA-binding protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00037ED299 similarity UNIREF
DB: UNIREF100
  • Identity: 79.8
  • Coverage: 119.0
  • Bit_score: 190
  • Evalue 1.40e-45
tRNA-binding protein {ECO:0000313|EMBL:ESX62939.1}; TaxID=1287294 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC422A00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.0
  • Coverage: 119.0
  • Bit_score: 183
  • Evalue 1.80e-43
csaA; Secretion chaperone CsaA; K06878 tRNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 78.9
  • Coverage: 109.0
  • Bit_score: 180
  • Evalue 4.40e-43

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Taxonomy

Mesorhizobium sp. LSHC422A00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 363
ATGGCGGCAGCCAAGAGCCCTCAGCCGGGGCCGATCACGTTCGACGATTTCCTGAAAGTCGATATCCGCGTCGGCACGATCGTCGCCGTCGAGCCGTTCCCGGAGGCGCGGAAGCCCGCATTCAAGCTGCGCATCGATTTCGGCGGTGAGATCGGCGTGAAGAAGAGCTCGGCCCAGATCACGAAATACTATGCTGCCGATGCGCTCGTTGGCCGGCAGGTGGCCGCAGTCGTGAACTTTCCCCCGCGCCAGATCGGGCCGTTCATGTCCGAGGTGCTGACGCTCGGCTTTCCCGATGCAGAGGGCGAGGTCGTGCTGATCGGGCCGGAGCGCAAAGTGCCCGACGGCGGGCGCCTCTTTTGA
PROTEIN sequence
Length: 121
MAAAKSPQPGPITFDDFLKVDIRVGTIVAVEPFPEARKPAFKLRIDFGGEIGVKKSSAQITKYYAADALVGRQVAAVVNFPPRQIGPFMSEVLTLGFPDAEGEVVLIGPERKVPDGGRLF*