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SCNpilot_expt_1000_bf_scaffold_12059_curated_6

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: comp(4791..5255)

Top 3 Functional Annotations

Value Algorithm Source
rRNA methylase; K03216 tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] similarity KEGG
DB: KEGG
  • Identity: 71.9
  • Coverage: 153.0
  • Bit_score: 215
  • Evalue 1.20e-53
tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmL {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.9
  • Coverage: 153.0
  • Bit_score: 215
  • Evalue 5.50e-53
tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JEY5_HYPSM similarity UNIREF
DB: UNIREF100
  • Identity: 71.9
  • Coverage: 153.0
  • Bit_score: 215
  • Evalue 3.90e-53

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Taxonomy

Hyphomicrobium sp. MC1 → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 465
ATGCGCCTGGCGCTCTATCAGCCTGACATTCCTCAGAATGCAGGCACGATCCTGCGTCTTGCCGCCTGCCTCGGCGTCGCCGTCGACGTGATCGGGCCCGCGGGCTTCGACATGAGCGACCGCAATCTGCGCCGCGCGGGGCTCGACTATCTCGATCATGTGGAGATCGTGCGCCATCTGTCGTTCTCGGCGTTCATGGCGGGCCGCGCGGCGGCGCCGGCCGGCCGACTCGTCCTGCTCACGACGGCGGCTGAAACTGCCTACACGGATTTTGCCTTCGCGCGCGACGACACGCTGCTGCTCGGCCGCGAGAGCGCGGGCGTTCCCGAGAGCGTTCACGAAGTGGTGGACGCGCGTGTCCGCATTCCCATGCAGCCGGGCCTGCGCTCGCTCAACATTGCCGTCGCAGCGGCCATGGTGCTCGGCGAGGCCCTGCGGCAGACTGGAGGCTTGGGCAAAAGCTAG
PROTEIN sequence
Length: 155
MRLALYQPDIPQNAGTILRLAACLGVAVDVIGPAGFDMSDRNLRRAGLDYLDHVEIVRHLSFSAFMAGRAAAPAGRLVLLTTAAETAYTDFAFARDDTLLLGRESAGVPESVHEVVDARVRIPMQPGLRSLNIAVAAAMVLGEALRQTGGLGKS*