ggKbase home page

SCNpilot_expt_1000_bf_scaffold_20955_curated_6

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: comp(4548..5312)

Top 3 Functional Annotations

Value Algorithm Source
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.9
  • Coverage: 244.0
  • Bit_score: 179
  • Evalue 5.50e-42
PAS sensor protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C4R1_NITHN similarity UNIREF
DB: UNIREF100
  • Identity: 39.9
  • Coverage: 248.0
  • Bit_score: 179
  • Evalue 3.90e-42
PAS sensor protein similarity KEGG
DB: KEGG
  • Identity: 39.9
  • Coverage: 248.0
  • Bit_score: 179
  • Evalue 1.20e-42

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrosococcus halophilus → Nitrosococcus → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 765
ATGGTCAGCGAGCGCAGGCGTTCTCAGGAGCAGGTCCAGGCGCAGCAGACCGAGCTCACGCATCTTCAGCGCCTCAACATCGGATCGGAAATGGCCTCTGCGCTCGCCCATGAACTGAGCCAGCCACTCACGGCAGCCATGAACTATACCTTGGCAGCGTTGCGCATGATCAAGGCTCCTGATCCCGATCTGGAGCGCGCGGCGGAGGTCTTGAGCAAGGGCATCAGCCAGGTCGAGGCCGCAGGCCAAACCGTGCATGGTCTTCGAGAGTTCATGCAGAAGAGCGAACTACGCCTGAGCCGTTCGCGCATTGACGAGACCGTGGAGCGGGCCTTCCATCTGGTTTCGGCGGAAGCCGATGCTGCACATATAGATCTACGTTCAGTTGGCCTGCCGGCCTTGCCGCCGGTCTATGTGGATCAGGTGCGCATCGTGCAGGTTTTGGTGAACCTTCTGCGCAATGCTGTGCAGGCGATCTCCGAAGCAAAGATGGCTTCCGGGGCCATAACAGTATCGGGAATGGATAACGGGGATCTGATCGAGATTTCCGTGGCCGATGCCGGACCGGGAATTGCCGCGGAAGTGATGGTGCGGCTCTTTTTGCCGTTCGTAAGTACGAAGGCGTCAGGTATGGGCCTCGGCCTCGCGATCAGCAAATCCATCCTCGAATCGCACGAGGGCGATCTGCAGGCTGTGGCGCTGCCGCAAGGCGCGCGTTTCAAGCTGACGCTGCCGCGCTCATCCGCGGAGATCCGCGATGCGTGA
PROTEIN sequence
Length: 255
MVSERRRSQEQVQAQQTELTHLQRLNIGSEMASALAHELSQPLTAAMNYTLAALRMIKAPDPDLERAAEVLSKGISQVEAAGQTVHGLREFMQKSELRLSRSRIDETVERAFHLVSAEADAAHIDLRSVGLPALPPVYVDQVRIVQVLVNLLRNAVQAISEAKMASGAITVSGMDNGDLIEISVADAGPGIAAEVMVRLFLPFVSTKASGMGLGLAISKSILESHEGDLQAVALPQGARFKLTLPRSSAEIRDA*