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SCNpilot_expt_1000_bf_scaffold_20955_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_20955_curated_1
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..498)
DNA (498bp) protein (166aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
Phosphate ABC transporter ATPase n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B2U0_9RHIZ
phosphate ABC transporter ATPase
SCNpilot_expt_1000_bf_scaffold_20955_curated_2
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(495..1346)
DNA (852bp) protein (284aa)
Phosphate ABC transporter, inner membrane subunit PstA n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JQX1_HYPDA
phosphate ABC transporter inner membrane subunit PstA; K02038 phosphate transport system permease protein
Phosphate ABC transporter, inner membrane subunit PstA {ECO:0000313|EMBL:ADJ22123.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
SCNpilot_expt_1000_bf_scaffold_20955_curated_3
unknown

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1554..2069
DNA (516bp) protein (172aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_20955_curated_4
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2467..3228)
DNA (762bp) protein (254aa)
Phosphate ABC transporter substrate-binding protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FGC5_9RHIZ
Phosphate-binding protein PstS {ECO:0000256|PIRNR:PIRNR002756}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
pstS; high-affinity phosphate ABC transporter substrate-binding protein; K02040 phosphate transport system substrate-binding protein
SCNpilot_expt_1000_bf_scaffold_20955_curated_5
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3947..4555)
DNA (609bp) protein (203aa)
Two component transcriptional regulatory protein, LuxR family n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AU16_AZOBR
fixJ1; two component transcriptional regulatory protein, LuxR family
Two component transcriptional regulatory protein, LuxR family {ECO:0000313|EMBL:CCD01425.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
SCNpilot_expt_1000_bf_scaffold_20955_curated_6
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4548..5312)
DNA (765bp) protein (255aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
PAS sensor protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C4R1_NITHN
PAS sensor protein
SCNpilot_expt_1000_bf_scaffold_20955_curated_7
unknown

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comp(6382..6633)
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_20955_curated_8
unknown

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comp(6860..7237)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J539_HYPSM
Uncharacterized protein {ECO:0000313|EMBL:CPR18787.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_20955_curated_9
Salinisphaera hydrothermalis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

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7862..8059
DNA (198bp) protein (66aa)
Flavodoxin related protein {ECO:0000313|EMBL:KEZ76148.1}; TaxID=1304275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaeraceae; Salinisphaera.;" source="Salinisphaera hydrothermalis C41B8.;"
SCNpilot_expt_1000_bf_scaffold_20955_curated_10
Salinisphaera hydrothermalis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

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8064..8333
DNA (270bp) protein (90aa)
Flavodoxin related protein n=1 Tax=Methanothermobacter marburgensis (strain DSM 2133 / 14651 / NBRC 100331 / OCM 82 / Marburg) RepID=D9PUS4_METTM
Flavodoxin related protein {ECO:0000313|EMBL:KEZ76148.1}; TaxID=1304275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaeraceae; Salinisphaera.;" source="Salinisphaera hydrothermalis C41B8.;"
flavodoxin related protein
SCNpilot_expt_1000_bf_scaffold_20955_curated_11
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8787..9233
DNA (447bp) protein (149aa)
3-demethylubiquinone-9 3-methyltransferase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000362839B
3-demethylubiquinone-9 3-methyltransferase {ECO:0000313|EMBL:EHK55678.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
3-demethylubiquinone-9 3-methyltransferase; K04750 PhnB protein
SCNpilot_expt_1000_bf_scaffold_20955_curated_12
unknown

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comp(9468..9773)
DNA (306bp) protein (102aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_20955_curated_13
unknown

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comp(9812..10018)
DNA (207bp) protein (69aa)

This feature has no annotations

Displaying 13 items

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