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SCNpilot_expt_1000_bf_scaffold_8343_curated_6

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: comp(3722..4321)

Top 3 Functional Annotations

Value Algorithm Source
Formate dehydrogenase (Quinone-dependent) catalytic subunit {ECO:0000313|EMBL:KGM86501.1}; EC=1.2.1.2 {ECO:0000313|EMBL:KGM86501.1};; TaxID=1288298 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius mucosus DSM 17069.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.9
  • Coverage: 199.0
  • Bit_score: 324
  • Evalue 1.40e-85
fdnG; formate dehydrogenase, major subunit; K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2] similarity KEGG
DB: KEGG
  • Identity: 77.6
  • Coverage: 165.0
  • Bit_score: 283
  • Evalue 6.20e-74
Formate dehydrogenase, major subunit n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J1C5_POLGS similarity UNIREF
DB: UNIREF100
  • Identity: 77.6
  • Coverage: 165.0
  • Bit_score: 283
  • Evalue 2.00e-73

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Taxonomy

Roseovarius mucosus → Roseovarius → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 600
ATGAACGTGCAATTCTCACGACGCCAGTTCCTTAAGGGGACGGGCGCGGGGGTTGCGGGTTCGGCGATCGGAGCCTTTGGCTTCGGGGGAGCTGAAGTAGCGCTCGCGCAGGCCGCGCACGCCTTCAAGCTTTCAAAAGCGACCGAGACCCGTAACACGTGCCCATACTGCTCAGTCAGCTGCGGCATGATTCTTTACAGCCGCGGTGATGTGAAGAAGGGCGAAAAGGCCGAGATCTTCCACATCGAAGGCGATGTCGACAACCCGGTGAACCGCGGCACGCTGTGCCCGAAGGGTGCCGGCGCCCTCGACTTCATCCACTCGAAACAGCGCGTCACCCGGCCGATGCACAGGAAGCCGGGCAGCGACAAGTTCGAGCCGGTCACCTGGGATTTCGCGATGGAGCGCATCGCGAAGCTCATGAAGGAAGACCGCGACGCGAACTTCATCGAGAAGACGCGCGACGGCGTCACGGTGAACCGCTGGCCCACCATGGGCTTCCTCGCCGGCTGTGCCACCTCGAACGAGGCGGGCTGGCTGACCTGGAAGGCCGTTCGTGGCCTCGGCATCGTGGCCGTCGACAACCAGGCACGTATCTGA
PROTEIN sequence
Length: 200
MNVQFSRRQFLKGTGAGVAGSAIGAFGFGGAEVALAQAAHAFKLSKATETRNTCPYCSVSCGMILYSRGDVKKGEKAEIFHIEGDVDNPVNRGTLCPKGAGALDFIHSKQRVTRPMHRKPGSDKFEPVTWDFAMERIAKLMKEDRDANFIEKTRDGVTVNRWPTMGFLAGCATSNEAGWLTWKAVRGLGIVAVDNQARI*