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SCNpilot_expt_1000_bf_scaffold_8343_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_8343_curated_1
Roseovarius mucosus, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..254)
DNA (252bp) protein (84aa)
Formate dehydrogenase, gamma subunit n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J1C8_POLGS
Formate dehydrogenase, gamma subunit {ECO:0000313|EMBL:KGM86504.1}; TaxID=1288298 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius mucosus DSM 17069.;"
formate dehydrogenase subunit gamma; K00127 formate dehydrogenase, gamma subunit
SCNpilot_expt_1000_bf_scaffold_8343_curated_2
unknown

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753..950
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_8343_curated_3
unknown

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1074..1208
DNA (135bp) protein (45aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_8343_curated_4
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1232..2953)
DNA (1722bp) protein (574aa)
formate dehydrogenase subunit alpha; K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2]
Formate dehydrogenase, alpha subunit n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J1C6_POLGS
Formate dehydrogenase, alpha subunit {ECO:0000313|EMBL:ADZ69708.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_expt_1000_bf_scaffold_8343_curated_5
unknown

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3084..3224
DNA (141bp) protein (47aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_8343_curated_6
Roseovarius mucosus, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3722..4321)
DNA (600bp) protein (200aa)
Formate dehydrogenase (Quinone-dependent) catalytic subunit {ECO:0000313|EMBL:KGM86501.1}; EC=1.2.1.2 {ECO:0000313|EMBL:KGM86501.1};; TaxID=1288298 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius mucosus DSM 17069.;"
fdnG; formate dehydrogenase, major subunit; K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2]
Formate dehydrogenase, major subunit n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J1C5_POLGS
SCNpilot_expt_1000_bf_scaffold_8343_curated_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4990..5631)
DNA (642bp) protein (214aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01YZ5_SOLUE
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
SCNpilot_expt_1000_bf_scaffold_8343_curated_8
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5646..6908)
DNA (1263bp) protein (421aa)
Sodium:proton antiporter n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SC48_9RHIZ
Sodium:proton antiporter {ECO:0000313|EMBL:AHB48103.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
potassium efflux transporter (ybaL); K03455 monovalent cation:H+ antiporter-2, CPA2 family
Displaying 8 items

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