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SCNpilot_expt_1000_bf_scaffold_1387_curated_17

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: 15860..16783

Top 3 Functional Annotations

Value Algorithm Source
truB; tRNA pseudouridine synthase B (EC:5.4.99.-); K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] similarity KEGG
DB: KEGG
  • Identity: 71.1
  • Coverage: 305.0
  • Bit_score: 430
  • Evalue 3.70e-118
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.1
  • Coverage: 305.0
  • Bit_score: 430
  • Evalue 1.60e-117
tRNA pseudouridine synthase B n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JFK9_HYPSM similarity UNIREF
DB: UNIREF100
  • Identity: 71.1
  • Coverage: 305.0
  • Bit_score: 430
  • Evalue 1.20e-117

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Taxonomy

Hyphomicrobium sp. MC1 → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 924
GTGGCGCGCCGCAAGAAGGGCAATCCGATCAACGGCTGGGTCGTGCTCGACAAGCCCGTCGGCATGACGTCGACGCAGGCTGTCGGCAAAGTACGCTGGCTCTTTCAGGCGCAGAAGGCCGGGCACGCCGGCACGCTCGACCCGCTGGCGACCGGCATCCTGCCGATCGCGCTTGGCGAGGCGACGAAGACCGTGCCTTACGCGGTCGACGGCCAGAAGGCCTACCGCTTCACGGTCCGCTGGGGCGCCGAGACCGACACCGACGACGCCGAGGGCCAGATCGTCGAGCGCAGCGACCTGCGCCCGACCCGCGCTTCGATCGAGGCGCTGCTGCCGAGCTTCCTCGGCGAGATCCTGCAGACGCCGCCCGCCTTCTCCGCGATCAAGATCGACGGCCAGCGCGCCTATGACCTCGCGCGCCAGGGCGAGACGGTGAAGCTCGAAGCGCGCCCCGTGCAGATCGACCGGCTTGAGCTCGTCGAGATGCCCGATCACGAGACCTCGGTGTTCGAGGCCGAATGCGGCCGCGGCACGTACGTCCGCGCCATTGCCCGCGACATCGGCCGCACGCTCGGCTGTCTCGGCCATGTGACGGCGCTCCGGCGCACGCGCGTCGGCCCCTTCGAGGAGGCACAAGCGGTCACCATCGAGGAGCTGGAAGCTGCGGCTGGCCACGACGACGGCGGCGCCGAGATCAAGACGCTGCTGCGCCCGGTCGAGAGCGCGCTCGCCGAGCTGCTCGAAGTCAACGTCTCACAGTCGGATGCGGCACGCCTCGCGCGCGGCCAGCCGGTGCTGCTGCGCGGGCGCGATGCGCCGGTCATGAGCGGGGAGGCCTTTGCTCTCTCGAAGGGCACGCTGATCGCCCTCTGCGAGATCGAGCGTGGCGAGCTGCGCCCGCTGCGCGTCTTCAATCAGGCCTGA
PROTEIN sequence
Length: 308
VARRKKGNPINGWVVLDKPVGMTSTQAVGKVRWLFQAQKAGHAGTLDPLATGILPIALGEATKTVPYAVDGQKAYRFTVRWGAETDTDDAEGQIVERSDLRPTRASIEALLPSFLGEILQTPPAFSAIKIDGQRAYDLARQGETVKLEARPVQIDRLELVEMPDHETSVFEAECGRGTYVRAIARDIGRTLGCLGHVTALRRTRVGPFEEAQAVTIEELEAAAGHDDGGAEIKTLLRPVESALAELLEVNVSQSDAARLARGQPVLLRGRDAPVMSGEAFALSKGTLIALCEIERGELRPLRVFNQA*