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SCNpilot_expt_1000_bf_scaffold_7261_curated_7

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: comp(8167..8715)

Top 3 Functional Annotations

Value Algorithm Source
TRAP transporter, DctQ-like membrane protein, putative n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IMY2_RHOCS similarity UNIREF
DB: UNIREF100
  • Identity: 48.6
  • Coverage: 173.0
  • Bit_score: 186
  • Evalue 3.00e-44
C4-dicarboxylate ABC transporter permease {ECO:0000313|EMBL:KJB91724.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.3
  • Coverage: 175.0
  • Bit_score: 200
  • Evalue 2.10e-48
TRAP transporter DctQ-like membrane protein similarity KEGG
DB: KEGG
  • Identity: 48.6
  • Coverage: 173.0
  • Bit_score: 186
  • Evalue 9.40e-45

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Taxonomy

Skermanella aerolata → Skermanella → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 549
ATGGGAGCGCTGGCCGGCTTCGTGCGGTTTGCCGAAGCCGTAAATGACTATGTTGGCCGCACCGTCGCCTGGCTCACGCTCGCGACGGTCATTATCTGCGCTACCGTCGTCTTCATTCGCTATGCGCTCCAGACCGGCTATGTCTGGATGCAGGAGCTTTACGTGTGGACGCACGCCGCAGCCTTCATGCTCGGCGCCGGCTACACGCTGATGGCCAACAAGCACGTCCGTGTCGACATCCTCTACGCTCGGGCCAGCCCAAGGAAACAGGCTTGGCTCGACCTCTTTTCGACACTGGTGTTTCTCTTCCCCTGGGTCATCCTGCTGACCTACTTCGCCTGGCCCTACGTGACGCACTCCTGGGCGCTCTACGAGACCTCCTCCCAGGTTGGCGGCATGCCCGGCCTCTACGTCATGAAGACGATCATCCTGGCCTTTTCCGGTCTCATGTTCCTGCAAGGGCTCGCCATCTGCGGTCGATGCATTCTCGTCCTCAACGGGCAGGGTCACCTGGCGCCGCCGCGCGCCGTCTCCGGCCTCGGCGAGTAA
PROTEIN sequence
Length: 183
MGALAGFVRFAEAVNDYVGRTVAWLTLATVIICATVVFIRYALQTGYVWMQELYVWTHAAAFMLGAGYTLMANKHVRVDILYARASPRKQAWLDLFSTLVFLFPWVILLTYFAWPYVTHSWALYETSSQVGGMPGLYVMKTIILAFSGLMFLQGLAICGRCILVLNGQGHLAPPRAVSGLGE*